RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 FAM69BQ5VUD6 431 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 LCN10Q6JVE6 187 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 SYTL1Q8IYJ3 562 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 CARFQ8N187 725 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 CCNYQ8ND76 341 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 BRSK1Q8TDC3 778 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 UBE2Q2Q8WVN8 375 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 FATE1Q969F0 183 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 EID2BQ96D98 161 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 IP6K3Q96PC2 410 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 TSGA13Q96PP4 275 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 BPIFA3Q9BQP9 254 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 ZCCHC2Q9C0B9 1178 aaKnown RBP17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 IMP3Q9NV31 184 aaKnown RBP17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 NFKBIL1Q9UBC1 381 aaPredicted RBP17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 PSMD13Q9UNM6 376 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 POLQO75417 2590 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 FBN2P35556 2912 aa17.39■□□□□ 0.37
TSPAN3-208ENST00000560514 CROCCQ5TZA2 2017 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 PEX12O00623 359 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 LRRTM2O43300 516 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 IGHEP01854 428 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 PIRTP0C851 137 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 PRF1P14222 555 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 MX2P20592 715 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 AGXTP21549 392 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 PRKAA1Q13131 559 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 MMRN1Q13201 1228 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 NCF4Q15080 339 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 PAFAH1B3Q15102 231 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 ASIC2Q16515 512 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 PRAMEF17Q5VTA0 474 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 SP5Q6BEB4 398 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 TXNRD3NBQ6F5E7 133 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 TMC3Q7Z5M5 1100 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 ST6GALNAC3Q8NDV1 305 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 SYT11Q9BT88 431 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 TLR10Q9BXR5 811 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 UNKQ9C0B0 810 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 ACTR5Q9H9F9 607 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 SYTL2Q9HCH5 934 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 MAGEE1Q9HCI5 957 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 ZNF711Q9Y462 761 aa17.38■□□□□ 0.37
TSPAN3-208ENST00000560514 POLEQ07864 2286 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 SMTNL1A8MU46 457 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 PRSS44E7EML9 344 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 CDH3P22223 829 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 GRNP28799 593 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 MYBPC3Q14896 1274 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 ZRSR2Q15696 482 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 HADHQ16836 314 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 KHDC1Q4VXA5 237 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 NCBP2-AS2Q69YL0 99 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 CCDC70Q6NSX1 233 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 C11orf96Q7Z7L8 435 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 MCEMP1Q8IX19 187 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 GALNT16Q8N428 558 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 VPS35Q96QK1 796 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 DPH2Q9BQC3 489 aaPredicted RBP17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 XPO4Q9C0E2 1151 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 HAUS4Q9H6D7 363 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 RTN4Q9NQC3 1192 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 PCMTD2Q9NV79 361 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 SERTAD3Q9UJW9 196 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 BTRCQ9Y297 605 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 SEC16AO15027 2179 aa17.37■□□□□ 0.37
TSPAN3-208ENST00000560514 HEATR9A2RTY3 570 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 OR6C74A6NCV1 312 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 TMEM150CB9EJG8 249 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 POP7O75817 140 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 MMP2P08253 660 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 MTHFD1P11586 935 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 BPIP17213 487 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 HNRNPH3P31942 346 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 RORAP35398 523 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 HADHAP40939 763 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 DMPKQ09013 629 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 PTCHD3Q3KNS1 767 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 FAM198BQ6UWH4 519 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 IGFL3Q6UXB1 125 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 ZC3H18Q86VM9 953 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 LRRN4Q8WUT4 740 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 ZNF830Q96NB3 372 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 SRPK1Q96SB4 655 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 C17orf62Q9BQA9 187 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 DHRS4Q9BTZ2 278 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 IP6K2Q9UHH9 426 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 OSGIN2Q9Y236 505 aa17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 CFAP20Q9Y6A4 193 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-208ENST00000560514 DDX3YO15523 660 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-208ENST00000560514 LDB2O43679 373 aa17.35■□□□□ 0.37
TSPAN3-208ENST00000560514 HBQ1P09105 142 aa17.35■□□□□ 0.37
TSPAN3-208ENST00000560514 CD48P09326 243 aa17.35■□□□□ 0.37
TSPAN3-208ENST00000560514 PBLDP30039 288 aaPredicted RBP17.35■□□□□ 0.37
TSPAN3-208ENST00000560514 PREPP48147 710 aa17.35■□□□□ 0.37
TSPAN3-208ENST00000560514 ARCN1P48444 511 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-208ENST00000560514 SLC25A11Q02978 314 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-208ENST00000560514 TYRO3Q06418 890 aa17.35■□□□□ 0.37
TSPAN3-208ENST00000560514 ABRQ12979 859 aa17.35■□□□□ 0.37
TSPAN3-208ENST00000560514 KRT33BQ14525 404 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms