RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 RDH11Q8TC12 318 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 ASZ1Q8WWH4 475 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 ELMO1Q92556 727 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 KIAA1191Q96A73 305 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 SPACA7Q96KW9 195 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 TFB2MQ9H5Q4 396 aaKnown RBP11.98□□□□□ -0.49
HERC1-205ENST00000559886 CCDC134Q9H6E4 229 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 PRMT8Q9NR22 394 aaPredicted RBP11.98□□□□□ -0.49
HERC1-205ENST00000559886 CPSF2Q9P2I0 782 aaKnown RBP11.98□□□□□ -0.49
HERC1-205ENST00000559886 COPG2Q9UBF2 871 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 GULP1Q9UBP9 304 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 SLC17A4Q9Y2C5 497 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 CA5BQ9Y2D0 317 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 GON4LQ3T8J9 2241 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 CCDC189A1A4V9 331 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 G3V2L1 256 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 H0Y8X5 98 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 GPC4O75487 556 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 CEACAM5P06731 702 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 BPGMP07738 259 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 ENO3P13929 434 aaPredicted RBP11.98□□□□□ -0.49
HERC1-205ENST00000559886 CPA3P15088 417 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 KIAA1024LP59773 190 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 PCLAFQ15004 111 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 USP39Q53GS9 565 aaKnown RBP11.98□□□□□ -0.49
HERC1-205ENST00000559886 C11orf96Q7Z7L8 435 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 ORAI3Q9BRQ5 295 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 ALG9Q9H6U8 611 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 MID2Q9UJV3 735 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 IKZF3Q9UKT9 509 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 CDYLQ9Y232 598 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 INVSQ9Y283 1065 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 PCYT1BQ9Y5K3 369 aaPredicted RBP11.98□□□□□ -0.49
HERC1-205ENST00000559886 ZFC3H1O60293 1989 aaKnown RBP11.97□□□□□ -0.49
HERC1-205ENST00000559886 C17orf113A0A1B0GUU1 675 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 A0A1W2PPC4 97 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 WDR91A4D1P6 747 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 TMEM202A6NGA9 273 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 METTL12A8MUP2 240 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 TOR1BO14657 336 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 SHOX2O60902 331 aaPredicted RBP11.97□□□□□ -0.49
HERC1-205ENST00000559886 SLCO2B1O94956 709 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 KCNC1P48547 511 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 YPEL5P62699 121 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 DMWDQ09019 674 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 HSPA14Q0VDF9 509 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 BOP1Q14137 746 aaKnown RBP11.97□□□□□ -0.49
HERC1-205ENST00000559886 OR4D1Q15615 310 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 PDK4Q16654 411 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 SLC36A4Q6YBV0 504 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 CYHR1Q6ZMK1 362 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 PIWIL4Q7Z3Z4 852 aaKnown RBP11.97□□□□□ -0.49
HERC1-205ENST00000559886 ABI3BPQ7Z7G0 1075 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 LRRTM4Q86VH4 590 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 MAGEB18Q96M61 343 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 MECRQ9BV79 373 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 RMI1Q9H9A7 625 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 SIRPGQ9P1W8 387 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 DNMT3AQ9Y6K1 912 aaPredicted RBP11.97□□□□□ -0.49
HERC1-205ENST00000559886 TTC28Q96AY4 2481 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 SLC5A10A0PJK1 596 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 CDC7O00311 574 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 GRID2O43424 1007 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 POP7O75817 140 aaKnown RBP11.97□□□□□ -0.49
HERC1-205ENST00000559886 FUCA1P04066 466 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 TDGF1P13385 188 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 ALDH3A1P30838 453 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 LSP1P33241 339 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 GNGT1P63211 74 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 NFATC4Q14934 902 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 TSNQ15631 228 aaKnown RBP11.97□□□□□ -0.49
HERC1-205ENST00000559886 CRTC3Q6UUV7 619 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 ZYG11AQ6WRX3 759 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 MYO1HQ8N1T3 1032 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 STAG3L4Q8TBR4 150 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 SCARF2Q96GP6 870 aaPredicted RBP11.97□□□□□ -0.49
HERC1-205ENST00000559886 ATOH8Q96SQ7 321 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 LRP4O75096 1905 aa11.97□□□□□ -0.49
HERC1-205ENST00000559886 THADAQ6YHU6 1953 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 BTN3A1O00481 513 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 MYL2P10916 166 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 KCNA4P22459 653 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 ARHGAP8P85298 464 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 RPL6Q02878 288 aaKnown RBP11.96□□□□□ -0.49
HERC1-205ENST00000559886 TSSK4Q6SA08 328 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 NEK10Q6ZWH5 1172 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 VRK3Q8IV63 474 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 NUDCD3Q8IVD9 361 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 C10orf107Q8IVU9 208 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 OR2L2Q8NH16 312 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 TMEM159Q96B96 161 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 PRKAB1Q9Y478 270 aa11.96□□□□□ -0.49
HERC1-205ENST00000559886 NPEPPSL1A6NEC2 478 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 MGAT4DA6NG13 374 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 LIN7AO14910 233 aaPredicted RBP11.96□□□□□ -0.5
HERC1-205ENST00000559886 KMOO15229 486 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 KERAO60938 352 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 MPC1LP0DKB6 136 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 KELP23276 732 aa11.96□□□□□ -0.5
HERC1-205ENST00000559886 CD27P26842 260 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms