RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 DRD3P35462 400 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 CST6Q15828 149 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 C2orf27AQ580R0 203 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 CDKL4Q5MAI5 379 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 DET1Q7L5Y6 550 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 C10orf67Q8IYJ2 551 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 CPSF7Q8N684 471 aaKnown RBP12.48□□□□□ -0.41
USP3-213ENST00000559711 CEP70Q8NHQ1 597 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 ACTRT2Q8TDY3 377 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 AGAP11Q8TF27 550 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 NUS1Q96E22 293 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 EPHX3Q9H6B9 360 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 ZBTB26Q9HCK0 441 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 SLC40A1Q9NP59 571 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 MID1IP1Q9NPA3 183 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 COQ6Q9Y2Z9 468 aa12.48□□□□□ -0.41
USP3-213ENST00000559711 SPECC1L-ADORA2AF8WAN1 911 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 E2F3O00716 465 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 AZIN1O14977 448 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 SLC22A2O15244 555 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 LZTS3O60299 673 aaPredicted RBP12.47□□□□□ -0.41
USP3-213ENST00000559711 RNASEH1O60930 286 aaKnown RBP12.47□□□□□ -0.41
USP3-213ENST00000559711 GPC4O75487 556 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 ADH1BP00325 375 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 FTH1P02794 183 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 ENO1P06733 434 aaKnown RBP12.47□□□□□ -0.41
USP3-213ENST00000559711 VCLP18206 1134 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 C5AR1P21730 350 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 IGFBP4P22692 258 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 ADSLP30566 484 aaPredicted RBP12.47□□□□□ -0.41
USP3-213ENST00000559711 CTHP32929 405 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 WASP42768 502 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 TMEM115Q12893 351 aaPredicted RBP12.47□□□□□ -0.41
USP3-213ENST00000559711 PHKG1Q16816 387 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 KANK2Q63ZY3 851 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 SULT1C3Q6IMI6 304 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 METTL2BQ6P1Q9 378 aaKnown RBP12.47□□□□□ -0.41
USP3-213ENST00000559711 NEK10Q6ZWH5 1172 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 PHYKPLQ8IUZ5 450 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 PELI3Q8N2H9 469 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 AADATQ8N5Z0 425 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 RASGEF1AQ8N9B8 481 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 OR56A4Q8NGH8 313 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 CXorf40AQ8TE69 158 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 GABRG3Q99928 467 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 BTBD10Q9BSF8 475 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 HGH1Q9BTY7 390 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 ZNF385DQ9H6B1 395 aa12.47□□□□□ -0.41
USP3-213ENST00000559711 UTP6Q9NYH9 597 aaKnown RBP12.47□□□□□ -0.41
USP3-213ENST00000559711 DENND4AQ7Z401 1863 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 TNRC18O15417 2968 aaPredicted RBP12.46□□□□□ -0.41
USP3-213ENST00000559711 GRXCR2A6NFK2 248 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 MID1O15344 667 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 SLC16A5O15375 505 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 TAPBPO15533 448 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 DCXO43602 365 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 TSPAN6O43657 245 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 SYNCRIPO60506 623 aaKnown RBP12.46□□□□□ -0.41
USP3-213ENST00000559711 SLCO2B1O94956 709 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 ESRRBO95718 433 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 S100BP04271 92 aaPredicted RBP12.46□□□□□ -0.41
USP3-213ENST00000559711 C8GP07360 202 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 KRT16P08779 473 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 ENO2P09104 434 aaPredicted RBP12.46□□□□□ -0.41
USP3-213ENST00000559711 PRDX6P30041 224 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 NTSR1P30989 418 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 TIE1P35590 1138 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 PRLHRP49683 370 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 TAS2R38P59533 333 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 HSPA14Q0VDF9 509 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 FBXO48Q5FWF7 155 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 ZNF648Q5T619 568 aaPredicted RBP12.46□□□□□ -0.41
USP3-213ENST00000559711 AGBL4Q5VU57 503 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 CLEC6AQ6EIG7 209 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 CHSY3Q70JA7 882 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 RASGRP3Q8IV61 690 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 UBTD2Q8WUN7 234 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 ASZ1Q8WWH4 475 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 ASB11Q8WXH4 323 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 UTP4Q969X6 686 aaKnown RBP12.46□□□□□ -0.41
USP3-213ENST00000559711 PPP1R36Q96LQ0 422 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 ZNF382Q96SR6 550 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 TBC1D10AQ9BXI6 508 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 SLC12A9Q9BXP2 914 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 SEMA4BQ9NPR2 832 aaPredicted RBP12.46□□□□□ -0.41
USP3-213ENST00000559711 TAS2R1Q9NYW7 299 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 EIF2B4Q9UI10 523 aaKnown RBP12.46□□□□□ -0.41
USP3-213ENST00000559711 TSR3Q9UJK0 312 aaKnown RBP12.46□□□□□ -0.41
USP3-213ENST00000559711 ZNF225Q9UK10 706 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 FIS1Q9Y3D6 152 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 ASB1Q9Y576 335 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 DNAJC15Q9Y5T4 150 aa12.46□□□□□ -0.41
USP3-213ENST00000559711 A0A1B0GTL3 188 aa12.45□□□□□ -0.42
USP3-213ENST00000559711 A0A1W2PPC1 479 aa12.45□□□□□ -0.42
USP3-213ENST00000559711 C2CD4DB7Z1M9 353 aa12.45□□□□□ -0.42
USP3-213ENST00000559711 H3BQ06 376 aaPredicted RBP12.45□□□□□ -0.42
USP3-213ENST00000559711 GFYI3L273 518 aa12.45□□□□□ -0.42
USP3-213ENST00000559711 K7ESM1 405 aa12.45□□□□□ -0.42
USP3-213ENST00000559711 SKAP2O75563 359 aaPredicted RBP12.45□□□□□ -0.42
USP3-213ENST00000559711 GPR1P46091 355 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms