RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787		J3QKU1	62 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	APOL1	O14791	398 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	GRID2	O43424	1007 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	MTX2	O75431	263 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	PMPCB	O75439	489 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	MT-CYB	P00156	380 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	KRT1	P04264	644 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	THRA	P10827	490 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	FOSL1	P15407	271 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	CA4	P22748	312 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	CSTF2	P33240	577 aa	Known RBP eCLIP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	MAN1A1	P33908	653 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	RPL26	P61254	145 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	IFI35	P80217	286 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	CCZ1B	P86790	482 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	CCZ1	P86791	482 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	PCDH1	Q08174	1060 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	ADCY2	Q08462	1091 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	NFATC3	Q12968	1075 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	CLCA4	Q14CN2	919 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	SPA17	Q15506	151 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	TBR1	Q16650	682 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	KHDC1	Q4VXA5	237 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	HENMT1	Q5T8I9	393 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	SLC9A4	Q6AI14	798 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	CDPF1	Q6NVV7	123 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	TMEM71	Q6P5X7	295 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	IYD	Q6PHW0	289 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	CRTC3	Q6UUV7	619 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	MFSD7	Q6UXD7	560 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	RFX6	Q8HWS3	928 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	AGBL5	Q8NDL9	886 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	OR4D9	Q8NGE8	314 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	CCHCR1	Q8TD31	782 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	NCSTN	Q92542	709 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	NKD1	Q969G9	470 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	IMP4	Q96G21	291 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	AHCYL2	Q96HN2	611 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	ZNF830	Q96NB3	372 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	TAAR9	Q96RI9	348 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	TRIB3	Q96RU7	358 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	LYSMD1	Q96S90	227 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	SPATA16	Q9BXB7	569 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	TBC1D10A	Q9BXI6	508 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	MAK16	Q9BXY0	300 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	ADGRE3	Q9BY15	652 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	TRIM4	Q9C037	500 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	OR2AG1	Q9H205	316 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	CLEC4M	Q9H2X3	399 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	APMAP	Q9HDC9	416 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	BPIFA1	Q9NP55	256 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	KLC4	Q9NSK0	619 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	PKD2L2	Q9NZM6	624 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	AKAP7	Q9P0M2	348 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	TRIM10	Q9UDY6	481 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	EGFL7	Q9UHF1	273 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	AMACR	Q9UHK6	382 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	TMPRSS11E	Q9UL52	423 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	RPL26L1	Q9UNX3	145 aa	Known RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	RNF114	Q9Y508	228 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	EPN1	Q9Y6I3	576 aa	Predicted RBP	6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	SDK2	Q58EX2	2172 aa		6.9	□□□□□ -1.3
MARK3-215	ENST00000558787	FLNC	Q14315	2725 aa		6.9	□□□□□ -1.31
MARK3-215	ENST00000558787		A6NCN8	305 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	STMND1	H3BQB6	276 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	HGS	O14964	777 aa	Predicted RBP	6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	ZW10	O43264	779 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	SLC28A2	O43868	658 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	NUAK1	O60285	661 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	SLC25A14	O95258	325 aa	Predicted RBP	6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	NDUFA10	O95299	355 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	PYGL	P06737	847 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	LIF	P15018	202 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	PECAM1	P16284	738 aa	Predicted RBP	6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	BPI	P17213	487 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	TYRP1	P17643	537 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	ITGB6	P18564	788 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	COMT	P21964	271 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	CA5A	P35218	305 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	UGT1A3	P35503	534 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	FASLG	P48023	281 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	HHEX	Q03014	270 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	CDK18	Q07002	472 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	SQSTM1	Q13501	440 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	PDK1	Q15118	436 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	SEPT7	Q16181	437 aa	Known RBP	6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	KAZN	Q674X7	775 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	TMC3	Q7Z5M5	1100 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	ADGRG6	Q86SQ4	1221 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	NT5DC3	Q86UY8	548 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	GALNT12	Q8IXK2	581 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	UNC5B	Q8IZJ1	945 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	CACNA2D3	Q8IZS8	1091 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	SLC25A41	Q8N5S1	370 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	BMPER	Q8N8U9	685 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	OR10G6	Q8NH81	332 aa		6.89	□□□□□ -1.31
MARK3-215	ENST00000558787	GLYATL1	Q969I3	302 aa		6.89	□□□□□ -1.31

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