RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 CCDC122Q5T0U0 273 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 MPP7Q5T2T1 576 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 DCAF12L1Q5VU92 463 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 LAIR1Q6GTX8 287 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 RWDD4Q6NW29 188 aaKnown RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 MARCH9Q86YJ5 346 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 VSTM4Q8IW00 320 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 RHOT2Q8IXI1 618 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 HJURPQ8NCD3 748 aaPredicted RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 ANKRD20A12PQ8NF67 263 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 OR6K2Q8NGY2 324 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 OR2T3Q8NH03 318 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ARHGEF2Q92974 986 aaKnown RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 BIRC7Q96CA5 298 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 SIPA1Q96FS4 1042 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 SLC35A4Q96G79 324 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 CELF6Q96J87 481 aaKnown RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 CAMK1GQ96NX5 476 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 HAPLN3Q96S86 360 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ZNF747Q9BV97 191 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 MRPL46Q9H2W6 279 aaKnown RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 GOLPH3Q9H4A6 298 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ZWILCHQ9H900 591 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 AKIP1Q9NQ31 210 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 GOLGA6AQ9NYA3 693 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 VSX1Q9NZR4 365 aaPredicted RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 CWC15Q9P013 229 aaKnown RBP4.3□□□□□ -1.72
SPG11-211ENST00000558561 VPS51Q9UID3 782 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 PILRBQ9UKJ0 227 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 PLA2G4CQ9UP65 541 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 MYRFQ9Y2G1 1151 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 ANKRD36A6QL64 1941 aa4.3□□□□□ -1.72
SPG11-211ENST00000558561 PCDH15Q96QU1 1955 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 PLXNB3Q9ULL4 1909 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 A0A088AWK7 358 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 A0A1B0GTW7 788 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 LNP1A1A4G5 178 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 TMEM110-MUSTN1A8MSY1 372 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 C10orf142B7Z368 130 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 GOLGA6L19H0YKK7 550 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 MATN3O15232 486 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 SYNCRIPO60506 623 aaKnown RBP4.29□□□□□ -1.72
SPG11-211ENST00000558561 LRCH4O75427 683 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 NDUFA10O95299 355 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 MATN4O95460 622 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 F9P00740 461 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 IL1BP01584 269 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 SERPING1P05155 500 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 CALB1P05937 261 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 IGHV4-34P06331 123 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 RHOCP08134 193 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 ELANEP08246 267 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 FTH1P19P0C7X4 201 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 GZMAP12544 262 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 MYF5P13349 255 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 GOT1P17174 413 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 ERCC2P18074 760 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 PSMA2P25787 234 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 CD6P30203 668 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 OR1E1P30953 314 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 MAT2AP31153 395 aaKnown RBP4.29□□□□□ -1.72
SPG11-211ENST00000558561 RDXP35241 583 aaKnown RBP4.29□□□□□ -1.72
SPG11-211ENST00000558561 MPLP40238 635 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 PSMD8P48556 350 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 DNA2P51530 1060 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 ZNF75DP51815 510 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 CDH4P55283 916 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 HSD11B2P80365 405 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 GNA12Q03113 381 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 CNTN1Q12860 1018 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 SLC10A2Q12908 348 aaPredicted RBP4.29□□□□□ -1.72
SPG11-211ENST00000558561 CDH18Q13634 790 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 FGL2Q14314 439 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 SMTNL2Q2TAL5 461 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 GFOD2Q3B7J2 385 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 LSM12Q3MHD2 195 aaKnown RBP4.29□□□□□ -1.72
SPG11-211ENST00000558561 BRMS1LQ5PSV4 323 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 TPRG1LQ5T0D9 272 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 FNDC7Q5VTL7 733 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 IGFL4Q6B9Z1 124 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 DNAJC24Q6P3W2 148 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 ALKBH5Q6P6C2 394 aaKnown RBP4.29□□□□□ -1.72
SPG11-211ENST00000558561 DCUN1D2Q6PH85 259 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 TRIM72Q6ZMU5 477 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 DPY19L3Q6ZPD9 716 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 MICALCLQ6ZW33 695 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 ARCQ7LC44 396 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 STRADAQ7RTN6 431 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.29□□□□□ -1.72
SPG11-211ENST00000558561 SLFN11Q7Z7L1 901 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 ZDHHC17Q8IUH5 632 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 ARHGAP12Q8IWW6 846 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 HDDC3Q8N4P3 179 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 NPWQ8N729 165 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 TC2NQ8N9U0 490 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 ATP11CQ8NB49 1132 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 TMIEQ8NEW7 156 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 OR2A12Q8NGT7 310 aa4.29□□□□□ -1.72
SPG11-211ENST00000558561 SLC25A43Q8WUT9 341 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms