RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ARMC8Q8IUR7 673 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 CNTROBQ8N137 903 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 RASGEF1CQ8N431 466 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 SLC5A8Q8N695 610 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 EMC1Q8N766 993 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 PAF1Q8N7H5 531 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 ZNF689Q96CS4 500 aaPredicted RBP3.79□□□□□ -1.8
VRK1-207ENST00000557352 CDK19Q9BWU1 502 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 RANGRFQ9HD47 186 aaPredicted RBP3.79□□□□□ -1.8
VRK1-207ENST00000557352 ZDHHC18Q9NUE0 388 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 SAGE1Q9NXZ1 904 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 LUZP4Q9P127 313 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 CACNG5Q9UF02 275 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 RASAL2Q9UJF2 1139 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 SLC13A4Q9UKG4 626 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 ARHGAP26Q9UNA1 814 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 KCNJ14Q9UNX9 436 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 KIF1BO60333 1816 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 ADGRL1O94910 1474 aa3.79□□□□□ -1.8
VRK1-207ENST00000557352 POGZQ7Z3K3 1410 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 ANKRD50Q9ULJ7 1429 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 ABCA6Q8N139 1617 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 MROH1Q8NDA8 1641 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 TCERG1O14776 1098 aaKnown RBP3.78□□□□□ -1.8
VRK1-207ENST00000557352 SEC14L2O76054 403 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 UBL4AP11441 157 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 XBP1P17861 261 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 ZNF10P21506 573 aaPredicted RBP3.78□□□□□ -1.8
VRK1-207ENST00000557352 CTSCP53634 463 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 OLR1P78380 273 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 MRPS34P82930 218 aaKnown RBP3.78□□□□□ -1.8
VRK1-207ENST00000557352 TMEM115Q12893 351 aaPredicted RBP3.78□□□□□ -1.8
VRK1-207ENST00000557352 CCNG2Q16589 344 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 DPCR1Q3MIW9 517 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 SH2D5Q6ZV89 423 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 LYG1Q8N1E2 194 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 ESX1Q8N693 406 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 PPP4R1Q8TF05 950 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 INTS12Q96CB8 462 aaKnown RBP3.78□□□□□ -1.8
VRK1-207ENST00000557352 EGLN2Q96KS0 407 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 POM121L2Q96KW2 1035 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 MAP7D2Q96T17 732 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 DCTN5Q9BTE1 182 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 AGXT2Q9BYV1 514 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 SIX2Q9NPC8 291 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 WASH6PQ9NQA3 447 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 TAS2R10Q9NYW0 307 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 CWC15Q9P013 229 aaKnown RBP3.78□□□□□ -1.8
VRK1-207ENST00000557352 PAK5Q9P286 719 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 DNAJB4Q9UDY4 337 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 LMTK2Q8IWU2 1503 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 ATP10AO60312 1499 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 DENND4BO75064 1496 aaPredicted RBP3.78□□□□□ -1.8
VRK1-207ENST00000557352 PZPP20742 1482 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 CD109Q6YHK3 1445 aa3.78□□□□□ -1.8
VRK1-207ENST00000557352 E9PCH4 1651 aa3.78□□□□□ -1.81
VRK1-207ENST00000557352 KIF15Q9NS87 1388 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 DIP2CQ9Y2E4 1556 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 A0A1W2PQF6 199 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 MAGEB17A8MXT2 336 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 PLOD2O00469 737 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 PLA2G4BP0C869 781 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 ZBED6P86452 979 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 TUBB2AQ13885 445 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 FFAR4Q5NUL3 377 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 GCSAMQ8N6F7 178 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 SMARCE1Q969G3 411 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 FAM149B1Q96BN6 582 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 PSMD1Q99460 953 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 TUBB2BQ9BVA1 445 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 UBXN6Q9BZV1 441 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 TRIM15Q9C019 465 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 TMEM39BQ9GZU3 492 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 WDR13Q9H1Z4 485 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 PTTG2Q9NZH5 202 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 PYGO1Q9Y3Y4 419 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 TMEM184BQ9Y519 407 aaPredicted RBP3.77□□□□□ -1.81
VRK1-207ENST00000557352 YIPF1Q9Y548 306 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 LRRFIP2Q9Y608 721 aaKnown RBP3.77□□□□□ -1.81
VRK1-207ENST00000557352 IFT172Q9UG01 1749 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 CFAP65Q6ZU64 1925 aaKnown RBP3.77□□□□□ -1.81
VRK1-207ENST00000557352 TRAPPC8Q9Y2L5 1435 aa3.77□□□□□ -1.81
VRK1-207ENST00000557352 ZNF644Q9H582 1327 aaPredicted RBP3.76□□□□□ -1.81
VRK1-207ENST00000557352 STK36Q9NRP7 1315 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 AGLP35573 1532 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 ARHGEF40Q8TER5 1519 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 MROH2AA6NES4 1674 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 KDM5AP29375 1690 aaKnown RBP3.76□□□□□ -1.81
VRK1-207ENST00000557352 A0A0J9YWU9 116 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 NPIPB15A6NHN6 443 aaPredicted RBP3.76□□□□□ -1.81
VRK1-207ENST00000557352 C15orf62A8K5M9 175 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 SLC25A12O75746 678 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 BMP10O95393 424 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 TSPY4P0CV99 314 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 TSPY10P0CW01 314 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 LIFP15018 202 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 SP100P23497 879 aaPredicted RBP3.76□□□□□ -1.81
VRK1-207ENST00000557352 NOVP48745 357 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 PPM1FP49593 454 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms