RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	MRPS18B	Q9Y676	258 aa	Known RBP	4.7	□□□□□ -1.66
SCFD1-223	ENST00000557076	ABCA4	P78363	2273 aa		4.7	□□□□□ -1.66
SCFD1-223	ENST00000557076	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	MYO7B	Q6PIF6	2116 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076		A0A0D9SEW6	157 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	ILVBL	A1L0T0	632 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	DRGX	A6NNA5	263 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076		B4DGG1	531 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	PRSS44	E7EML9	344 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	POLR1C	O15160	346 aa	Predicted RBP	4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	PPM1D	O15297	605 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	KRT86	O43790	486 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	KATNA1	O75449	491 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	ZMPSTE24	O75844	475 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	CEACAM4	O75871	244 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	DNAJB5	O75953	348 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	ENDOD1	O94919	500 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	CD1E	P15812	388 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	MAK	P20794	623 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	KEL	P23276	732 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	AOAH	P28039	575 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	TRIM23	P36406	574 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	RGS7	P49802	495 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	DNA2	P51530	1060 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	CCL11	P51671	97 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	CCNH	P51946	323 aa	Predicted RBP	4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	YWHAZ	P63104	245 aa	Known RBP	4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	PPP3CA	Q08209	521 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	FOXL1	Q12952	345 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	PEX6	Q13608	980 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	IRF4	Q15306	451 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	TCEA2	Q15560	299 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	MYLK3	Q32MK0	819 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	TMEM52B	Q4KMG9	183 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	PRR30	Q53SZ7	412 aa	Predicted RBP	4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	NKAIN2	Q5VXU1	208 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	KCTD16	Q68DU8	428 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	KRT39	Q6A163	491 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	FOXR2	Q6PJQ5	311 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	LINGO4	Q6UY18	593 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	ZNF783	Q6ZMS7	281 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	UNC13D	Q70J99	1090 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	INTS8	Q75QN2	995 aa	Known RBP	4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	ADGRE4P	Q86SQ3	457 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	TMEM135	Q86UB9	458 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	MTDH	Q86UE4	582 aa	Known RBP	4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	TAC4	Q86UU9	113 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	SLC47A2	Q86VL8	602 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	RHOT1	Q8IXI2	618 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	CISD2	Q8N5K1	135 aa	Known RBP	4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	OR56A4	Q8NGH8	313 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	HCAR2	Q8TDS4	363 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	CXorf40A	Q8TE69	158 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	ZNF483	Q8TF39	744 aa	Predicted RBP	4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	OR1E3	Q8WZA6	343 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	CFHR4	Q92496	578 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	SEMA4D	Q92854	862 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	FBXW5	Q969U6	566 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	VOPP1	Q96AW1	172 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	FAM149B1	Q96BN6	582 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	EEF2KMT	Q96G04	330 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	MED15	Q96RN5	788 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	CTRC	Q99895	268 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	BTBD2	Q9BX70	525 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	GPR87	Q9BY21	358 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	TRIM55	Q9BYV6	548 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	ING2	Q9H160	280 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	OR10A2	Q9H208	303 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	KCTD10	Q9H3F6	313 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	POPDC2	Q9HBU9	364 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	TMEM8A	Q9HCN3	771 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	ASF1B	Q9NVP2	202 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	RAB20	Q9NX57	234 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	RRN3	Q9NYV6	651 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	PLA2G3	Q9NZ20	509 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	OR1A2	Q9Y585	309 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	CLIC4	Q9Y696	253 aa		4.69	□□□□□ -1.66
SCFD1-223	ENST00000557076	SEC16A	O15027	2179 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	COL6A5	A8TX70	2615 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	FN1	P02751	2386 aa	Known RBP	4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	CFAP69	A5D8W1	941 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	TMEM202	A6NGA9	273 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	C21orf140	B9A014	251 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	GSTA4	O15217	222 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	LRRTM2	O43300	516 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	ZG16	O60844	167 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	CD160	O95971	181 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	NR3C1	P04150	777 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	PAEP	P09466	180 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	CCNB1	P14635	433 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	CD19	P15391	556 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	BPI	P17213	487 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	LPO	P22079	712 aa	Predicted RBP	4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	SSTR2	P30874	369 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	MSX2	P35548	267 aa	Predicted RBP	4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	ADCY8	P40145	1251 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	GPD2	P43304	727 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	ACADSB	P45954	432 aa		4.68	□□□□□ -1.66
SCFD1-223	ENST00000557076	MEOX1	P50221	254 aa		4.68	□□□□□ -1.66

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