RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 FAM182AQ5T1J6 154 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF449Q6P9G9 518 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 FAM151BQ6UXP7 276 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 GALNT12Q8IXK2 581 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 IL22RA1Q8N6P7 574 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 HEXDCQ8WVB3 486 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 ITPKCQ96DU7 683 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 SPATA13Q96N96 652 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 TEFMQ96QE5 360 aaKnown RBP7.21□□□□□ -1.26
SCFD1-222ENST00000556768 ZPBPQ9BS86 351 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 FICDQ9BVA6 458 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 SLC39A1Q9NY26 324 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 SPO11Q9Y5K1 396 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 PTPRBP23467 1997 aa7.21□□□□□ -1.26
SCFD1-222ENST00000556768 BOD1L1Q8NFC6 3051 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 PRAMEF33A0A0G2JMD5 474 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 GRID2IPA4D2P6 1211 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 A8MU76 341 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 K7ENP7 123 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ATXN7O15265 892 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 PSMD3O43242 534 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 UGT1A9O60656 530 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 PRAMEF10O60809 474 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 UBXN7O94888 489 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 PRAMEF1O95521 474 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 THRAP10827 490 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 UGT1A6P19224 532 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 UGT1A1P22309 533 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 UGT1A4P22310 534 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 STIP1P31948 543 aaKnown RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 UGT1A3P35503 534 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 RELBQ01201 579 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 KRT33BQ14525 404 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 C16orf72Q14CZ0 275 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 CHRNA6Q15825 494 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 PARP6Q2NL67 630 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 PLA2G4EQ3MJ16 856 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF648Q5T619 568 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 CYB5D1Q6P9G0 228 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 INO80CQ6PI98 192 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ABRAXAS1Q6UWZ7 409 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 WASH2PQ6VEQ5 465 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 RANBP10Q6VN20 620 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF574Q6ZN55 896 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF761Q86XN6 746 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 LRRC57Q8N9N7 239 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 FAM71DQ8N9W8 422 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 CCDC110Q8TBZ0 833 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ART4Q93070 314 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 WBP1Q96G27 269 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ZDHHC12Q96GR4 267 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 HSH2DQ96JZ2 352 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ASB8Q9H765 288 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF395Q9H8N7 513 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 UCK1Q9HA47 277 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 UGT1A7Q9HAW7 530 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 UGT1A10Q9HAW8 530 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 UGT1A8Q9HAW9 530 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 WASH6PQ9NQA3 447 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 POT1Q9NUX5 634 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ARL5AQ9Y689 179 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 PMS2P1A4D2B8 440 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 LILRA5A6NI73 299 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 EFCAB7A8K855 629 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 B4E171 279 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 E7EVH7 732 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 POLR1CO15160 346 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 TOX3O15405 576 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 BUD23O43709 281 aaKnown RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 POP7O75817 140 aaKnown RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 RASSF9O75901 435 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 EML2O95834 649 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 FTCDO95954 541 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 FGF3P11487 239 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 CCL4P13236 92 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 PSMB4P28070 264 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 GPC1P35052 558 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 TSPAN7P41732 249 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 LMAN1P49257 510 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 DRG2P55039 364 aaKnown RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 LAMB3Q13751 1172 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 FNBP1LQ5T0N5 605 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 SEL1L2Q5TEA6 688 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 AGAP9Q5VTM2 703 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 TMEM220Q6QAJ8 160 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 CEACAM20Q6UY09 585 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 TMEM26Q6ZUK4 368 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 TMPRSS9Q7Z410 1059 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 LINC00523Q86TU6 105 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 GAS2L3Q86XJ1 694 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 TTC30BQ8N4P2 665 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 DDHD1Q8NEL9 900 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 OR4K2Q8NGD2 314 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 SNRNP27Q8WVK2 155 aaKnown RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ALG3Q92685 438 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ULK4Q96C45 1275 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 TTC1Q99614 292 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 FAM118BQ9BPY3 351 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 C19orf43Q9BQ61 176 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms