RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 IMP4Q96G21 291 aaKnown RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 TCTN2Q96GX1 697 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 SMAD5Q99717 465 aaKnown RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 NUDT9Q9BW91 350 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 CBX8Q9HC52 389 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 C5AR2Q9P296 337 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 TCFL5Q9UL49 500 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 SLC5A6Q9Y289 635 aa11.61□□□□□ -0.55
ACTN1-221ENST00000556571 BZW2Q9Y6E2 419 aaKnown RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 DNMT3AQ9Y6K1 912 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 ANKRD17O75179 2603 aaKnown RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 ZNF106Q9H2Y7 1883 aaKnown RBP11.61□□□□□ -0.55
ACTN1-221ENST00000556571 A6NL46 340 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 POP7O75817 140 aaKnown RBP11.6□□□□□ -0.55
ACTN1-221ENST00000556571 CBX6O95503 412 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 GJC1P36383 396 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 ITGA1P56199 1179 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 NR6A1Q15406 480 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 SLC14A2Q15849 920 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 ZRANB3Q5FWF4 1079 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 ARMC6Q6NXE6 501 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 OOSP2Q86WS3 158 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 DSELQ8IZU8 1212 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 IQCKQ8N0W5 287 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 DTX3LQ8TDB6 740 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 SNRNP40Q96DI7 357 aaKnown RBP11.6□□□□□ -0.55
ACTN1-221ENST00000556571 C19orf60Q96EN9 201 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 C5orf34Q96MH7 638 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 ZCCHC2Q9C0B9 1178 aaKnown RBP11.6□□□□□ -0.55
ACTN1-221ENST00000556571 SLC25A51Q9H1U9 297 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 PSMD13Q9UNM6 376 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 BTRCQ9Y297 605 aa11.6□□□□□ -0.55
ACTN1-221ENST00000556571 KRT86O43790 486 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 NDST3O95803 873 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 TPM3P06753 285 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 MTHFD1P11586 935 aaKnown RBP11.59□□□□□ -0.55
ACTN1-221ENST00000556571 HMGCLP35914 325 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 XRCC4Q13426 336 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 IQCB1Q15051 598 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 PCSK7Q16549 785 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 PLEKHN1Q494U1 663 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-221ENST00000556571 LDLRAP1Q5SW96 308 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 ZDHHC20Q5W0Z9 365 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 METRNLQ641Q3 311 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 LCN10Q6JVE6 187 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 TTC30BQ8N4P2 665 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 ZBTB2Q8N680 514 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 BEND7Q8N7W2 519 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-221ENST00000556571 RASGEF1AQ8N9B8 481 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 TADA1Q96BN2 335 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 CLIP3Q96DZ5 547 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 SGSM3Q96HU1 749 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 AGAP3Q96P47 875 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 FANCEQ9HB96 536 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 SYTL2Q9HCH5 934 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 BPIFA1Q9NP55 256 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 IL26Q9NPH9 171 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 IMP3Q9NV31 184 aaKnown RBP11.59□□□□□ -0.55
ACTN1-221ENST00000556571 ASF1BQ9NVP2 202 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 SOHLH2Q9NX45 425 aa11.59□□□□□ -0.55
ACTN1-221ENST00000556571 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.59□□□□□ -0.55
ACTN1-221ENST00000556571 POLQO75417 2590 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 OR6C74A6NCV1 312 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 ANKUB1A6NFN9 424 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 AURKAO14965 403 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 PROSCO94903 275 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 CAPN1P07384 714 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 SPTBP11277 2137 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 TNFRSF8P28908 595 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 RORAP35398 523 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 CTSCP53634 463 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 AP1B1Q10567 949 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 ELOAQ14241 798 aaKnown RBP11.58□□□□□ -0.56
ACTN1-221ENST00000556571 NFE2L1Q14494 772 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 PDK1Q15118 436 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 VWA5B1Q5TIE3 1220 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 PRAMEF17Q5VTA0 474 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 HGSNATQ68CP4 663 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 TMEM220Q6QAJ8 160 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 FAM83HQ6ZRV2 1179 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-221ENST00000556571 RAB43Q86YS6 212 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 SLC34A3Q8N130 599 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 CISD2Q8N5K1 135 aaKnown RBP11.58□□□□□ -0.56
ACTN1-221ENST00000556571 TTC13Q8NBP0 860 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 RNF157Q96PX1 679 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 INSM2Q96T92 566 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-221ENST00000556571 CEP41Q9BYV8 373 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 TSPY26PQ9H489 355 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 TRABDQ9H4I3 376 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 PCMTD2Q9NV79 361 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 SLC24A2Q9UI40 661 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 ACSL5Q9ULC5 683 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 B3GNT3Q9Y2A9 372 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 HEY1Q9Y5J3 304 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 SPO11Q9Y5K1 396 aa11.58□□□□□ -0.56
ACTN1-221ENST00000556571 A0A1B0GTH6 734 aa11.57□□□□□ -0.56
ACTN1-221ENST00000556571 KLHL33A6NCF5 533 aa11.57□□□□□ -0.56
ACTN1-221ENST00000556571 SLC9B1P1A6NJY1 282 aa11.57□□□□□ -0.56
ACTN1-221ENST00000556571 UGT1A9O60656 530 aa11.57□□□□□ -0.56
ACTN1-221ENST00000556571 KLHL41O60662 606 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms