RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 MTMR10Q9NXD2 777 aa2.54□□□□□ -2
SRP54-207ENST00000555535 CAMK2AQ9UQM7 478 aa2.54□□□□□ -2
SRP54-207ENST00000555535 NTNG1Q9Y2I2 539 aa2.54□□□□□ -2
SRP54-207ENST00000555535 RABGAP1Q9Y3P9 1069 aa2.54□□□□□ -2
SRP54-207ENST00000555535 TMEM184BQ9Y519 407 aaPredicted RBP2.54□□□□□ -2
SRP54-207ENST00000555535 MAU2Q9Y6X3 613 aa2.54□□□□□ -2
SRP54-207ENST00000555535 KDM3AQ9Y4C1 1321 aa2.53□□□□□ -2
SRP54-207ENST00000555535 IGLV9-49A0A0B4J1Y8 123 aa2.53□□□□□ -2
SRP54-207ENST00000555535 OR2M5A3KFT3 312 aa2.53□□□□□ -2
SRP54-207ENST00000555535 ZNF197O14709 1029 aa2.53□□□□□ -2
SRP54-207ENST00000555535 TGFB1I1O43294 461 aa2.53□□□□□ -2
SRP54-207ENST00000555535 GPR137BO60478 399 aa2.53□□□□□ -2
SRP54-207ENST00000555535 NFKBIAP25963 317 aa2.53□□□□□ -2
SRP54-207ENST00000555535 ICAM3P32942 547 aa2.53□□□□□ -2
SRP54-207ENST00000555535 F2RL1P55085 397 aa2.53□□□□□ -2
SRP54-207ENST00000555535 MFAP5Q13361 173 aa2.53□□□□□ -2
SRP54-207ENST00000555535 LRIF1Q5T3J3 769 aa2.53□□□□□ -2
SRP54-207ENST00000555535 CYP4A22Q5TCH4 519 aa2.53□□□□□ -2
SRP54-207ENST00000555535 ANKRD18AQ8IVF6 992 aa2.53□□□□□ -2
SRP54-207ENST00000555535 CRYBG2Q8N1P7 616 aa2.53□□□□□ -2
SRP54-207ENST00000555535 OMA1Q96E52 524 aa2.53□□□□□ -2
SRP54-207ENST00000555535 SAAL1Q96ER3 474 aa2.53□□□□□ -2
SRP54-207ENST00000555535 UBXN10Q96LJ8 280 aa2.53□□□□□ -2
SRP54-207ENST00000555535 SYT15Q9BQS2 421 aa2.53□□□□□ -2
SRP54-207ENST00000555535 SEMA6AQ9H2E6 1030 aa2.53□□□□□ -2
SRP54-207ENST00000555535 SCPEP1Q9HB40 452 aa2.53□□□□□ -2
SRP54-207ENST00000555535 ABCB10Q9NRK6 738 aa2.53□□□□□ -2
SRP54-207ENST00000555535 ECHDC1Q9NTX5 307 aa2.53□□□□□ -2
SRP54-207ENST00000555535 COQ3Q9NZJ6 369 aa2.53□□□□□ -2
SRP54-207ENST00000555535 UBA2Q9UBT2 640 aaPredicted RBP2.53□□□□□ -2
SRP54-207ENST00000555535 NAALADL1Q9UQQ1 740 aa2.53□□□□□ -2
SRP54-207ENST00000555535 IGHV4-61A0A0C4DH41 118 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 C15orf62A8K5M9 175 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 PAGE4O60829 102 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 ZNF217O75362 1048 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 IGHV4-59P01825 116 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 ABCD3P28288 659 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 PRCPP42785 496 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 PAFAH1B1P43034 410 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 EIF3BP55884 814 aaKnown RBP2.52□□□□□ -2.01
SRP54-207ENST00000555535 VAMP2P63027 116 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 MS4A2Q01362 244 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 DMKNQ6E0U4 476 aaPredicted RBP2.52□□□□□ -2.01
SRP54-207ENST00000555535 CDC73Q6P1J9 531 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 CYP26C1Q6V0L0 522 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 ZNF383Q8NA42 475 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 NFKBIDQ8NI38 313 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 PPP4R1Q8TF05 950 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 ZFAND2BQ8WV99 257 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 TRIM6Q9C030 488 aaPredicted RBP2.52□□□□□ -2.01
SRP54-207ENST00000555535 RNF186Q9NXI6 227 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 RCC2Q9P258 522 aaKnown RBP2.52□□□□□ -2.01
SRP54-207ENST00000555535 CYP46A1Q9Y6A2 500 aa2.52□□□□□ -2.01
SRP54-207ENST00000555535 A0A1W2PQF6 199 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 KANSL1LA0AUZ9 987 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 OR6C76A6NM76 312 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 EIF3CLB5ME19 914 aaKnown RBP2.51□□□□□ -2.01
SRP54-207ENST00000555535 BCL2L11O43521 198 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 CKMT2P17540 419 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 ZBTB25P24278 435 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 EPHA8P29322 1005 aaPredicted RBP2.51□□□□□ -2.01
SRP54-207ENST00000555535 CDH11P55287 796 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 MRPS34P82930 218 aaKnown RBP2.51□□□□□ -2.01
SRP54-207ENST00000555535 CEBPZQ03701 1054 aaKnown RBP2.51□□□□□ -2.01
SRP54-207ENST00000555535 LRMPQ12912 555 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 PRKAA1Q13131 559 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 TRPC3Q13507 836 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 FRG1Q14331 258 aaKnown RBP2.51□□□□□ -2.01
SRP54-207ENST00000555535 TAF12Q16514 161 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 GRAMD1BQ3KR37 738 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 DENND5BQ6ZUT9 1274 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 GSTA5Q7RTV2 222 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 KRTAP11-1Q8IUC1 163 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 CEP97Q8IW35 865 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 CNTROBQ8N137 903 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 DCLK2Q8N568 766 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 TMEM178AQ8NBL3 297 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 OR2T11Q8NH01 316 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 HTRA1Q92743 480 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 LINC00167Q96N53 147 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 PIP5K1AQ99755 562 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 STRA6Q9BX79 667 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 RAB11FIP5Q9BXF6 653 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 TMEM39BQ9GZU3 492 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 RANGRFQ9HD47 186 aaPredicted RBP2.51□□□□□ -2.01
SRP54-207ENST00000555535 INTS9Q9NV88 658 aaKnown RBP2.51□□□□□ -2.01
SRP54-207ENST00000555535 TAB2Q9NYJ8 693 aa2.51□□□□□ -2.01
SRP54-207ENST00000555535 COL16A1Q07092 1604 aaPredicted RBP2.5□□□□□ -2.01
SRP54-207ENST00000555535 ABCA7Q8IZY2 2146 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 ASTN2O75129 1339 aaPredicted RBP2.5□□□□□ -2.01
SRP54-207ENST00000555535 A0A1W2PRG0 241 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 MEX3AA1L020 520 aaKnown RBP2.5□□□□□ -2.01
SRP54-207ENST00000555535 J3QR06 171 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 DNM1LO00429 736 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 ARL1P40616 181 aaPredicted RBP2.5□□□□□ -2.01
SRP54-207ENST00000555535 TAS2R40P59535 323 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 COX10Q12887 443 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 OS9Q13438 667 aaPredicted RBP2.5□□□□□ -2.01
SRP54-207ENST00000555535 GRAPQ13588 217 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 HNRNPDQ14103 355 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms