RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 KPNA5O15131 536 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 GPC4O75487 556 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 PIAS1O75925 651 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 ANXA6P08133 673 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 IDSP22304 550 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 AOAHP28039 575 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 CCR7P32248 378 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 ACTR1BP42025 376 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 SKIV2L2P42285 1042 aaKnown RBP12.45□□□□□ -0.42
SYNE2-219ENST00000555323 ACTR1AP61163 376 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 TIAL1Q01085 375 aaKnown RBP eCLIP12.45□□□□□ -0.42
SYNE2-219ENST00000555323 IL9RQ01113 521 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 RPA4Q13156 261 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 NFE2L1Q14494 772 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 INSCQ1MX18 579 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 AGAP9Q5VTM2 703 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 GATAD2AQ86YP4 633 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 CFAP206Q8IYR0 622 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 MREGQ8N565 214 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 PPM1NQ8N819 430 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 FAM46DQ8NEK8 389 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 MYRIPQ8NFW9 859 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 OR4C6Q8NH72 309 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 HM13Q8TCT9 377 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 RBBP8Q99708 897 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 DPEP2Q9H4A9 486 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 SPATS2LQ9NUQ6 558 aaKnown RBP12.45□□□□□ -0.42
SYNE2-219ENST00000555323 KCNK6Q9Y257 313 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 VWA7Q9Y334 891 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 LAMA1P25391 3075 aa12.45□□□□□ -0.42
SYNE2-219ENST00000555323 TMEM131Q92545 1883 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 CCDC151A5D8V7 595 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 OR5K4A6NMS3 321 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 TRIM38O00635 465 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 TM4SF5O14894 197 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 FLRT2O43155 660 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 NIPSNAP2O75323 286 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 SLCO2B1O94956 709 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 TRIM16O95361 564 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 F7P08709 466 aaPredicted RBP12.44□□□□□ -0.42
SYNE2-219ENST00000555323 CHRM3P20309 590 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 GRK6P43250 576 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 CLCN7P51798 805 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 GBX1Q14549 363 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 BRD3Q15059 726 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 UAP1Q16222 522 aaPredicted RBP12.44□□□□□ -0.42
SYNE2-219ENST00000555323 KLHL38Q2WGJ6 581 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 MAP9Q49MG5 647 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 PLEKHS1Q5SXH7 462 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 C6orf132Q5T0Z8 1188 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 CAPRIN2Q6IMN6 1127 aaKnown RBP12.44□□□□□ -0.42
SYNE2-219ENST00000555323 FAM45BPQ6NSW5 357 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 IYDQ6PHW0 289 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 SLC30A9Q6PML9 568 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 FAM83HQ6ZRV2 1179 aaPredicted RBP12.44□□□□□ -0.42
SYNE2-219ENST00000555323 CTAGE3PQ8IX95 158 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 CNPY4Q8N129 248 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 NAGSQ8N159 534 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 KRT222Q8N1A0 295 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 GPR156Q8NFN8 814 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 FAM45AQ8TCE6 357 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 LKAAEAR1Q8TD35 194 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 ASZ1Q8WWH4 475 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 SLC44A1Q8WWI5 657 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 ELMO1Q92556 727 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 VPS39Q96JC1 886 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 DHRS4Q9BTZ2 278 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 CCDC68Q9H2F9 335 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 COG4Q9H9E3 785 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 TXNDC16Q9P2K2 825 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 TBC1D29Q9UFV1 150 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 ZNF180Q9UJW8 692 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 DOLKQ9UPQ8 538 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 CDYLQ9Y232 598 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 DHRS7Q9Y394 339 aa12.44□□□□□ -0.42
SYNE2-219ENST00000555323 RIF1Q5UIP0 2472 aaKnown RBP12.44□□□□□ -0.42
SYNE2-219ENST00000555323 FRYLO94915 3013 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-219ENST00000555323 CBFA2T3O75081 653 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 ALPPL2P10696 532 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 F3P13726 295 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 BRAFP15056 766 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 SPRP35270 261 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-219ENST00000555323 HSD17B3P37058 310 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 LIMK2P53671 638 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 EFTUD2Q15029 972 aaKnown RBP eCLIP12.43□□□□□ -0.42
SYNE2-219ENST00000555323 DEFB133Q30KQ1 61 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 UAP1L1Q3KQV9 507 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 PLA2G4EQ3MJ16 856 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 RBM20Q5T481 1227 aaKnown RBP12.43□□□□□ -0.42
SYNE2-219ENST00000555323 HECTD2Q5U5R9 776 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 UGT3A1Q6NUS8 523 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 ZCCHC8Q6NZY4 707 aaKnown RBP12.43□□□□□ -0.42
SYNE2-219ENST00000555323 OTOAQ7RTW8 1153 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 PIP4P1Q86T03 277 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 KIAA2013Q8IYS2 634 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 LILRA3Q8N6C8 439 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-219ENST00000555323 BAHD1Q8TBE0 780 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-219ENST00000555323 NETO1Q8TDF5 533 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 HNRNPLLQ8WVV9 542 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms