RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 FAM186AA6NE01 2351 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 E9PBE3 544 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 PLRG1O43660 514 aaKnown RBP17.16■□□□□ 0.34
SHOX-204ENST00000554971 KLHL41O60662 606 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 RPP40O75818 363 aaKnown RBP17.16■□□□□ 0.34
SHOX-204ENST00000554971 PIK3R1P27986 724 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 CD6P30203 668 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 GMPRP36959 345 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 TAS2R39P59534 338 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 MPP1Q00013 466 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 TBL3Q12788 808 aaKnown RBP17.16■□□□□ 0.34
SHOX-204ENST00000554971 MSLNQ13421 630 aaPredicted RBP17.16■□□□□ 0.34
SHOX-204ENST00000554971 CUL3Q13618 768 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 LSM12Q3MHD2 195 aaKnown RBP17.16■□□□□ 0.34
SHOX-204ENST00000554971 BRAT1Q6PJG6 821 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 KYQ8NBH2 561 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 HCAR2Q8TDS4 363 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 GANCQ8TET4 914 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 PIH1D2Q8WWB5 315 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 GAB3Q8WWW8 586 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 NXNL1Q96CM4 212 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 MAELQ96JY0 434 aaKnown RBP17.16■□□□□ 0.34
SHOX-204ENST00000554971 LENG8Q96PV6 779 aaPredicted RBP17.16■□□□□ 0.34
SHOX-204ENST00000554971 OR52B2Q96RD2 323 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 PLXNA2O75051 1894 aa17.16■□□□□ 0.34
SHOX-204ENST00000554971 MAGEA13PA6NCF6 341 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 MEI4A8MW99 385 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 AREL1O15033 823 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 EPOP01588 193 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 CHRNGP07510 517 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 SAT1P21673 171 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 MPSTP25325 297 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 SEMG2Q02383 582 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 CYLC2Q14093 348 aaPredicted RBP17.15■□□□□ 0.34
SHOX-204ENST00000554971 ACAP2Q15057 778 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 KDELC2Q7Z4H8 507 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 SLC22A9Q8IVM8 553 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 CEP97Q8IW35 865 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 LSMEM2Q8N112 164 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 OR14C36Q8NHC7 312 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 TRMOQ9BU70 441 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 BTBD1Q9H0C5 482 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 DYRK4Q9NR20 520 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 RIMKLBQ9ULI2 386 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 POMPQ9Y244 141 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 LOC100653049A0A140TA62 436 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 MROH6A6NGR9 719 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 KRT34O76011 436 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 LTA4HP09960 611 aaKnown RBP17.15■□□□□ 0.34
SHOX-204ENST00000554971 PCSK7Q16549 785 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 FBXL19Q6PCT2 694 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 DHDDSQ86SQ9 333 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 TMEM126BQ8IUX1 230 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 PRRX2Q99811 253 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 GPR174Q9BXC1 333 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 C6orf106Q9H6K1 298 aaPredicted RBP17.15■□□□□ 0.34
SHOX-204ENST00000554971 SPATS2LQ9NUQ6 558 aaKnown RBP17.15■□□□□ 0.34
SHOX-204ENST00000554971 ZDHHC2Q9UIJ5 367 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 SCOCQ9UIL1 159 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 FADS3Q9Y5Q0 445 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 SCN8AQ9UQD0 1980 aa17.15■□□□□ 0.34
SHOX-204ENST00000554971 A0A0U1RQS6 177 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 UPK3BL1B0FP48 263 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 UPK3BL2E5RIL1 263 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 PEX1O43933 1283 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 ARMC12Q5T9G4 340 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 CEP70Q8NHQ1 597 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 SPACA7Q96KW9 195 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 TTC1Q99614 292 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 ECSITQ9BQ95 431 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 SGK2Q9HBY8 427 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 PCDH12Q9NPG4 1184 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 MRPL40Q9NQ50 206 aaKnown RBP17.14■□□□□ 0.33
SHOX-204ENST00000554971 SLC2A6Q9UGQ3 507 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 NCKAP1Q9Y2A7 1128 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 PIEZO1Q92508 2521 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 RALGAPA1Q6GYQ0 2036 aa17.14■□□□□ 0.33
SHOX-204ENST00000554971 LOC285095A0A1B0GVY8 99 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 SEMA4FO95754 770 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 BAG2O95816 211 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 OXTRP30559 389 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 GLRBP48167 497 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 PPP2CBP62714 309 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 PPP2CAP67775 309 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 CCNIQ14094 377 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 SEPT6Q14141 434 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 GALNT3Q14435 633 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 DEFB119Q8N690 84 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 HEXDCQ8WVB3 486 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 UBXN10Q96LJ8 280 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 DUSP15Q9H1R2 295 aaPredicted RBP17.13■□□□□ 0.33
SHOX-204ENST00000554971 EFCAB1Q9HAE3 211 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 IGSF5Q9NSI5 407 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 RAPGEFL1Q9UHV5 662 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 PPIL1Q9Y3C6 166 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 CABIN1Q9Y6J0 2220 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 ALPIP09923 528 aa17.13■□□□□ 0.33
SHOX-204ENST00000554971 ATXN1LP0C7T5 689 aaKnown RBP17.13■□□□□ 0.33
SHOX-204ENST00000554971 MMP12P39900 470 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms