RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TEFMQ96QE5 360 aaKnown RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 SPATA16Q9BXB7 569 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 ADNPQ9H2P0 1102 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 FBXO8Q9NRD0 319 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 KLC4Q9NSK0 619 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 ZNF624Q9P2J8 865 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 R3HDM2Q9Y2K5 976 aaKnown RBP10.41□□□□□ -0.74
SHMT2-215ENST00000554656 ZNF711Q9Y462 761 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 HEY1Q9Y5J3 304 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 SPO11Q9Y5K1 396 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 LRRK2Q5S007 2527 aa10.41□□□□□ -0.74
SHMT2-215ENST00000554656 SPENQ96T58 3664 aaKnown RBP10.4□□□□□ -0.74
SHMT2-215ENST00000554656 APOL1O14791 398 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 SLC25A14O95258 325 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-215ENST00000554656 MT-CYBP00156 380 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-215ENST00000554656 C9P02748 559 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 ANKRD34CP0C6C1 535 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 ZNF28P17035 718 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 BPIP17213 487 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 TYRP1P17643 537 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 F8A1P23610 371 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 SLC19A1P41440 591 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 PPM1FP49593 454 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-215ENST00000554656 OTUD4Q01804 1114 aaKnown RBP10.4□□□□□ -0.74
SHMT2-215ENST00000554656 CAV1Q03135 178 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 TLE1Q04724 770 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 ADCY2Q08462 1091 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 PCSK7Q16549 785 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 SKIDA1Q1XH10 827 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 CEACAM20Q6UY09 585 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 PHYKPLQ8IUZ5 450 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 MREGQ8N565 214 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 BBOF1Q8ND07 529 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 GLYATL1Q969I3 302 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 SH3KBP1Q96B97 665 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 HAUS1Q96CS2 278 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 PKNOX2Q96KN3 472 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 AGAP3Q96P47 875 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 ADGRE3Q9BY15 652 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 EPN3Q9H201 632 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 OSGEPL1Q9H4B0 414 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 GPN2Q9H9Y4 310 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-215ENST00000554656 UCK1Q9HA47 277 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 ZFYVE1Q9HBF4 777 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 TRIM39Q9HCM9 518 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 WHRNQ9P202 907 aa10.4□□□□□ -0.74
SHMT2-215ENST00000554656 MRPS18BQ9Y676 258 aaKnown RBP10.4□□□□□ -0.74
SHMT2-215ENST00000554656 OR5K4A6NMS3 321 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 HACD1B0YJ81 288 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 GPR39O43194 453 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 SLC2A4P14672 509 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 ZNF7P17097 686 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-215ENST00000554656 XRCC1P18887 633 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-215ENST00000554656 MAP4P27816 1152 aaKnown RBP10.39□□□□□ -0.75
SHMT2-215ENST00000554656 STIP1P31948 543 aaKnown RBP10.39□□□□□ -0.75
SHMT2-215ENST00000554656 CA5AP35218 305 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 STAT5AP42229 794 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 KCNJ1P48048 391 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 LEPRP48357 1165 aaKnown RBP10.39□□□□□ -0.75
SHMT2-215ENST00000554656 CARSP49589 748 aaKnown RBP10.39□□□□□ -0.75
SHMT2-215ENST00000554656 SH3BP2P78314 561 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 ABHD18Q0P651 414 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 AP1B1Q10567 949 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 PPP1R7Q15435 360 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 SEPT7Q16181 437 aaKnown RBP10.39□□□□□ -0.75
SHMT2-215ENST00000554656 C4orf22Q6V702 233 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 TMEM26Q6ZUK4 368 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 C11orf96Q7Z7L8 435 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 TRAM1L1Q8N609 369 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 ATG4AQ8WYN0 398 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 RSC1A1Q92681 617 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 P3H4Q92791 437 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 C9orf72Q96LT7 481 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 TRIM51Q9BSJ1 452 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 ZSCAN5AQ9BUG6 496 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 TSPYL1Q9H0U9 437 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 SLC25A51Q9H1U9 297 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 EPB41L1Q9H4G0 881 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 STN1Q9H668 368 aaKnown RBP10.39□□□□□ -0.75
SHMT2-215ENST00000554656 VIPAS39Q9H9C1 493 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 MAGEE1Q9HCI5 957 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 HAUS2Q9NVX0 235 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 TUBD1Q9UJT1 453 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 ZNF148Q9UQR1 794 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 DNAJC16Q9Y2G8 782 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 NEU2Q9Y3R4 380 aa10.39□□□□□ -0.75
SHMT2-215ENST00000554656 TNRC6AQ8NDV7 1962 aaKnown RBP10.39□□□□□ -0.75
SHMT2-215ENST00000554656 OR52A4PA6NMU1 304 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 SMAPO00193 183 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 POLR1CO15160 346 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-215ENST00000554656 KMOO15229 486 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 KIF1CO43896 1103 aaKnown RBP10.38□□□□□ -0.75
SHMT2-215ENST00000554656 UBXN7O94888 489 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 NDST3O95803 873 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 KRT14P02533 472 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 FURINP09958 794 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 MYBL2P10244 700 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 RBP3P10745 1247 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 PTPN3P26045 913 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 RPL10P27635 214 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms