RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ARHGAP22Q7Z5H3 698 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 PDZD3Q86UT5 571 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 TRIM48Q8IWZ4 208 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 RASGEF1CQ8N431 466 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 CCDC89Q8N998 374 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 GLIS1Q8NBF1 620 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 AGBL5Q8NDL9 886 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 OR52K1Q8NGK4 314 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 OR2L2Q8NH16 312 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 PRR7Q8TB68 274 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 SNRNP27Q8WVK2 155 aaKnown RBP7.38□□□□□ -1.23
LINC00640-201ENST00000554409 PEX13Q92968 403 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 CXorf40BQ96DE9 158 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 CDKN2AIPNLQ96HQ2 116 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 SGSM3Q96HU1 749 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 TAAR9Q96RI9 348 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 COPS8Q99627 209 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 TBC1D10AQ9BXI6 508 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 RAB33BQ9H082 229 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 CASS4Q9NQ75 786 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 EIF2B3Q9NR50 452 aaKnown RBP7.38□□□□□ -1.23
LINC00640-201ENST00000554409 RAB6BQ9NRW1 208 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 HOMER3Q9NSC5 361 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 ZDHHC3Q9NYG2 299 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 OGFRQ9NZT2 677 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 TMEM9Q9P0T7 183 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 PISDQ9UG56 409 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 ACSL5Q9ULC5 683 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 WDR37Q9Y2I8 494 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 JRKLQ9Y4A0 524 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 PCDHGA3Q9Y5H0 932 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 SLC30A1Q9Y6M5 507 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 ZZEF1O43149 2961 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 OR52A4PA6NMU1 304 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 C9orf172C9J069 976 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 E7EVH7 732 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 CCL22O00626 93 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 CEP104O60308 925 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 UBXN7O94888 489 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 AP2A2O94973 939 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 GSTM1P09488 218 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 LIPCP11150 499 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 FGF3P11487 239 aaPredicted RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 ETS1P14921 441 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 ADRA1DP25100 572 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 PBLDP30039 288 aaPredicted RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 FOXN2P32314 431 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 CSTF2P33240 577 aaKnown RBP eCLIP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 RPL22P35268 128 aaKnown RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 CAPZBP47756 277 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 GSTM4Q03013 218 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 ACVR1Q04771 509 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 CLN3Q13286 438 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 SEPT6Q14141 434 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 GPR18Q14330 331 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 NFE2L1Q14494 772 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 ITIH4Q14624 930 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 RPE65Q16518 533 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 SKIDA1Q1XH10 827 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 TUSC1Q2TAM9 212 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 ZNF658BQ4V348 819 aaPredicted RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 ZRANB3Q5FWF4 1079 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 TSTD2Q5T7W7 516 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 TMEM164Q5U3C3 297 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 PACS1Q6VY07 963 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 PPP1R21Q6ZMI0 780 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 FAM83HQ6ZRV2 1179 aaPredicted RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 DET1Q7L5Y6 550 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 NLRP9Q7RTR0 991 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 JAMLQ86YT9 394 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 PLXDC1Q8IUK5 500 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 TAB3Q8N5C8 712 aaPredicted RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 BEND7Q8N7W2 519 aaPredicted RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 BMPERQ8N8U9 685 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 DNAAF3Q8N9W5 541 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 RCBTB1Q8NDN9 531 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 OR13J1Q8NGT2 312 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 ZFPM2Q8WW38 1151 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 NCSTNQ92542 709 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 USP7Q93009 1102 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 SGF29Q96ES7 293 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 DCUN1D1Q96GG9 259 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 CRELD1Q96HD1 420 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 NAF1Q96HR8 494 aaKnown RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 PBKQ96KB5 322 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 FCRL3Q96P31 734 aaPredicted RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 DDA1Q9BW61 102 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 ZMYND15Q9H091 742 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 FAM96AQ9H5X1 160 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 PIH1D1Q9NWS0 290 aaKnown RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 EPHA6Q9UF33 1036 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 TTC7AQ9ULT0 858 aaPredicted RBP7.37□□□□□ -1.23
LINC00640-201ENST00000554409 PIKFYVEQ9Y2I7 2098 aa7.37□□□□□ -1.23
LINC00640-201ENST00000554409 SDK2Q58EX2 2172 aa7.36□□□□□ -1.23
LINC00640-201ENST00000554409 FAM208BQ5VWN6 2430 aa7.36□□□□□ -1.23
LINC00640-201ENST00000554409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.36□□□□□ -1.23
LINC00640-201ENST00000554409 TEX51A0A1B0GUA7 166 aa7.36□□□□□ -1.23
LINC00640-201ENST00000554409 AP3B1O00203 1094 aa7.36□□□□□ -1.23
LINC00640-201ENST00000554409 QSOX1O00391 747 aa7.36□□□□□ -1.23
LINC00640-201ENST00000554409 KLK10O43240 276 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms