RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ACTR1AP61163 376 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 CDK3Q00526 305 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 DHX9Q08211 1270 aaKnown RBP13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 KCNAB2Q13303 367 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 PEX6Q13608 980 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 FASTKD3Q14CZ7 662 aaKnown RBP13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 HIF1AQ16665 826 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 ARMC12Q5T9G4 340 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 PPP1R21Q6ZMI0 780 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 Q6ZVL8 140 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 IGDCC3Q8IVU1 814 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 NRSN1Q8IZ57 195 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 LPCAT1Q8NF37 534 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 PHACTR1Q9C0D0 580 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 CDH19Q9H159 772 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 ADNPQ9H2P0 1102 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 PLAC1Q9HBJ0 212 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 KCNK4Q9NYG8 393 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 TMEM9Q9P0T7 183 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 PPIL1Q9Y3C6 166 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 PLEKHM1Q9Y4G2 1056 aa13.83□□□□□ -0.2
SPTLC2-202ENST00000554365 SDK2Q58EX2 2172 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 TRBV23OR9-2A0A075B6M9 112 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 IGHV1OR21-1A0A087WYE8 117 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 NPIPB15A6NHN6 443 aaPredicted RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 EFCAB7A8K855 629 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 RAD1O60671 282 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 CYP2A6P11509 494 aaPredicted RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 TPH1P17752 444 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 CA4P22748 312 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 MCM3P25205 808 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 MGAT1P26572 445 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 CSF2RBP32927 897 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 GPR1P46091 355 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 SESN2P58004 480 aaPredicted RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 RPL26P61254 145 aaKnown RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 SARNPP82979 210 aaKnown RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 SRSF1Q07955 248 aaKnown RBP eCLIP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 CDH17Q12864 832 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 DCAF12Q5T6F0 453 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 UBAP2Q5T6F2 1119 aaKnown RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 MARK2Q7KZI7 788 aaKnown RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 ZNF761Q86XN6 746 aaPredicted RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 AHCYL2Q96HN2 611 aaKnown RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 OR2M4Q96R27 311 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 DDA1Q9BW61 102 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 OCIAD1Q9NX40 245 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 SYBUQ9NX95 663 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 MTRF1LQ9UGC7 380 aaKnown RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 PHTF1Q9UMS5 762 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 RPL26L1Q9UNX3 145 aaKnown RBP13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 SLC17A4Q9Y2C5 497 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 TMEM98Q9Y2Y6 226 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 SPO11Q9Y5K1 396 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 TEX264Q9Y6I9 313 aa13.82□□□□□ -0.2
SPTLC2-202ENST00000554365 SPTA1P02549 2419 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 NAV2Q8IVL1 2488 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 A0A0J9YYE9 177 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 A0A0U1RQS6 177 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 ZNF891A8MT65 544 aaPredicted RBP13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 ANKRD66B4E2M5 251 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 PSMD11O00231 422 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 EIF3HO15372 352 aaKnown RBP eCLIP13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 TRBC1P01850 177 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 IVLP07476 585 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 THRAP10827 490 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 H2AFXP16104 143 aaPredicted RBP13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 CTPS1P17812 591 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 CCR10P46092 362 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 NPY2RP49146 381 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 CRADDP78560 199 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 PDIA2Q13087 525 aaKnown RBP13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 BRD3Q15059 726 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 SKIDA1Q1XH10 827 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 BBS9Q3SYG4 887 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 SNAP47Q5SQN1 464 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 ANKS6Q68DC2 871 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 USP45Q70EL2 814 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 TMC3Q7Z5M5 1100 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 TSPAN33Q86UF1 283 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 RELL1Q8IUW5 271 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 PDIK1LQ8N165 341 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 CBARPQ8N350 705 aaPredicted RBP13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 DNAAF3Q8N9W5 541 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 MCCC1Q96RQ3 725 aaPredicted RBP13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 DPYSL5Q9BPU6 564 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 TRIM56Q9BRZ2 755 aaKnown RBP13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 ADGRE3Q9BY15 652 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 ASPSCR1Q9BZE9 553 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 EPN3Q9H201 632 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 SAYSD1Q9NPB0 183 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 CD84Q9UIB8 345 aa13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 ARHGEF17Q96PE2 2063 aaPredicted RBP13.81□□□□□ -0.2
SPTLC2-202ENST00000554365 TLN1Q9Y490 2541 aaKnown RBP13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 CCDC151A5D8V7 595 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 A8MU76 341 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 B4E171 279 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 AP3B1O00203 1094 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 PIRTP0C851 137 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms