RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.36
SHMT2-211ENST00000554310 TRBV5-4A0A0C4DH59 114 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 HEATR9A2RTY3 570 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 CCL22O00626 93 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 POP7O75817 140 aaKnown RBP12.82□□□□□ -0.36
SHMT2-211ENST00000554310 SEC31AO94979 1220 aaKnown RBP12.82□□□□□ -0.36
SHMT2-211ENST00000554310 APRTP07741 180 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 HGFP14210 728 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 BRAFP15056 766 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 TPH1P17752 444 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 PSMA3P25788 255 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 RPL10P27635 214 aaKnown RBP12.82□□□□□ -0.36
SHMT2-211ENST00000554310 PPM1FP49593 454 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-211ENST00000554310 PRLHRP49683 370 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 DRG2P55039 364 aaKnown RBP12.82□□□□□ -0.36
SHMT2-211ENST00000554310 CACNG1Q06432 222 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 C19orf48Q6RUI8 117 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 ZNF574Q6ZN55 896 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-211ENST00000554310 TMEM26Q6ZUK4 368 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 DET1Q7L5Y6 550 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 KRT222Q8N1A0 295 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 RASGEF1CQ8N431 466 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 GLIS1Q8NBF1 620 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 LINC00615Q96LM1 132 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-211ENST00000554310 RANBP9Q96S59 729 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 FUT8Q9BYC5 575 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 B3GNT4Q9C0J1 378 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 PIH1D1Q9NWS0 290 aaKnown RBP12.82□□□□□ -0.36
SHMT2-211ENST00000554310 ZNF624Q9P2J8 865 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-211ENST00000554310 PDP2Q9P2J9 529 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 ACSL6Q9UKU0 697 aa12.82□□□□□ -0.36
SHMT2-211ENST00000554310 PIKFYVEQ9Y2I7 2098 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 IGLV3-16A0A075B6K0 115 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 MGAT4DA6NG13 374 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 MAP2K7O14733 419 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 NVLO15381 856 aaKnown RBP12.81□□□□□ -0.36
SHMT2-211ENST00000554310 HOXB3P14651 431 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-211ENST00000554310 ETS1P14921 441 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 ACRV1P26436 265 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 ITPKBP27987 946 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 TNFRSF8P28908 595 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 RPL22P35268 128 aaKnown RBP12.81□□□□□ -0.36
SHMT2-211ENST00000554310 SLC19A1P41440 591 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 MAPK9P45984 424 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 CFHR1Q03591 330 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 TLE3Q04726 772 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 NFE2L1Q14494 772 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 SKIDA1Q1XH10 827 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 ZRANB3Q5FWF4 1079 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 NLRP9Q7RTR0 991 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 GSTA5Q7RTV2 222 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 PRUNE1Q86TP1 453 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 JAMLQ86YT9 394 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 SPACA3Q8IXA5 215 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 AGBL5Q8NDL9 886 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 RCBTB1Q8NDN9 531 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 OR2L2Q8NH16 312 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 PEX13Q92968 403 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 CXorf40BQ96DE9 158 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 SGF29Q96ES7 293 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 CDKN2AIPNLQ96HQ2 116 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 MS4A14Q96JA4 679 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 NAP1L3Q99457 506 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-211ENST00000554310 DPH1Q9BZG8 443 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 VPS37BQ9H9H4 285 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 SLC40A1Q9NP59 571 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 CASS4Q9NQ75 786 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 ZDHHC3Q9NYG2 299 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 RIMKLBQ9ULI2 386 aa12.81□□□□□ -0.36
SHMT2-211ENST00000554310 TTC7AQ9ULT0 858 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-211ENST00000554310 MN1Q10571 1320 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-211ENST00000554310 CACNA1GO43497 2377 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 OR52A4PA6NMU1 304 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 CCDC188H7C350 402 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 AP3B1O00203 1094 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 ZSCAN5DPP0CG00 497 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 ITIH1P19827 911 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 CD82P27701 267 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 PBLDP30039 288 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-211ENST00000554310 SLC5A2P31639 672 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 CSTF2P33240 577 aaKnown RBP eCLIP12.8□□□□□ -0.36
SHMT2-211ENST00000554310 UCNP55089 124 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 BASP1P80723 227 aaKnown RBP12.8□□□□□ -0.36
SHMT2-211ENST00000554310 TMEM164Q5U3C3 297 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 METRNLQ641Q3 311 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 C8orf74Q6P047 294 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 AFTPHQ6ULP2 937 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 FAM83HQ6ZRV2 1179 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-211ENST00000554310 HDXQ7Z353 690 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 PDZD3Q86UT5 571 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 SERPINA9Q86WD7 417 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 PLXDC1Q8IUK5 500 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 BEND7Q8N7W2 519 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-211ENST00000554310 PRELID2Q8N945 189 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 HM13Q8TCT9 377 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 NCSTNQ92542 709 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.8□□□□□ -0.36
SHMT2-211ENST00000554310 LRRC1Q9BTT6 524 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 TBC1D10AQ9BXI6 508 aa12.8□□□□□ -0.36
SHMT2-211ENST00000554310 FAM96AQ9H5X1 160 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms