RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 HACD2Q6Y1H2 254 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 CDHR3Q6ZTQ4 885 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 SLC26A9Q7LBE3 791 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF410Q86VK4 478 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ERI1Q8IV48 349 aaKnown RBP5.9□□□□□ -1.46
VPS33B-203ENST00000554264 CCDC117Q8IWD4 279 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ADGRF2Q8IZF7 708 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 MAML2Q8IZL2 1156 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-203ENST00000554264 NUP93Q8N1F7 819 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 NXPE1Q8N323 547 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 PQLC3Q8N755 202 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 STPG3Q8N7X2 389 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 CHST14Q8NCH0 376 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 PRPF31Q8WWY3 499 aaKnown RBP5.9□□□□□ -1.46
VPS33B-203ENST00000554264 HTR3CQ8WXA8 447 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 RXFP2Q8WXD0 754 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 CENPIQ92674 756 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-203ENST00000554264 LPPQ93052 612 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 TMEM143Q96AN5 459 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 CERS2Q96G23 380 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 DCUN1D1Q96GG9 259 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF668Q96K58 619 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-203ENST00000554264 MYADMQ96S97 322 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 RBBP8Q99708 897 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 HERC2P3Q9BVR0 1158 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 VN1R3Q9BXE9 311 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 TRIM15Q9C019 465 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 HAPLN2Q9GZV7 340 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 IL22Q9GZX6 179 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 DRC3Q9H069 523 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 MUC13Q9H3R2 512 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 PLEKHA5Q9HAU0 1116 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 LRRC4Q9HBW1 653 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 PALMDQ9NP74 551 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 PARD6AQ9NPB6 346 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 PNPLA3Q9NST1 481 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 ZSCAN32Q9NX65 697 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 BFARQ9NZS9 450 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 GMEB2Q9UKD1 530 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 TRHDEQ9UKU6 1024 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 CDYLQ9Y232 598 aa5.9□□□□□ -1.46
VPS33B-203ENST00000554264 PIN4Q9Y237 131 aaKnown RBP5.9□□□□□ -1.46
VPS33B-203ENST00000554264 OTOGLQ3ZCN5 2332 aa5.9□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF891A8MT65 544 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 BBIP1A8MTZ0 92 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CXorf49A8MYA2 514 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TRIM38O00635 465 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TXNDC9O14530 226 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF195O14628 629 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TPP1O14773 563 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 NRP1O14786 923 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TEX28O15482 410 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 XPOTO43592 962 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CBFA2T3O75081 653 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CALCAP01258 141 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ALDOAP04075 364 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CD48P09326 243 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 INHBBP09529 407 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 GLULP15104 373 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 HOXB6P17509 224 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 PSMC3P17980 439 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 NCF2P19878 526 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CYP2F1P24903 491 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 PEX2P28328 305 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 MAGEA8P43361 318 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 HCAR3P49019 387 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 RPL34P49207 117 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CDK9P50750 372 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 RPL14P50914 215 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 EPHB1P54762 984 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 AQP4P55087 323 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TXNL4AP83876 142 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 HPCAP84074 193 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 SLC25A3Q00325 362 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CREMQ03060 361 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CSTF1Q05048 431 aaKnown RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 GAD2Q05329 585 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 LAMTOR4Q0VGL1 99 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 GALNT1Q10472 559 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZBTB17Q13105 803 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 MSLNQ13421 630 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ART3Q13508 389 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 PDE1CQ14123 709 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TMEM132DQ14C87 1099 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 MLF2Q15773 248 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 KCTD19Q17RG1 926 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ANO4Q32M45 955 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 KCTD21Q4G0X4 260 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 SFT2D3Q587I9 215 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 PIGGQ5H8A4 983 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 ZBTB41Q5SVQ8 909 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 LIPMQ5VYY2 423 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 PRMT9Q6P2P2 845 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CASC4Q6P4E1 433 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 OLFML1Q6UWY5 402 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 FAM183BPQ6ZVS7 135 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 TTLL10Q6ZVT0 673 aa5.89□□□□□ -1.47
VPS33B-203ENST00000554264 CYP4V2Q6ZWL3 525 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-203ENST00000554264 UBE2R2Q712K3 238 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms