RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 PNLIPP16233 465 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 ITGALP20701 1170 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 ACRV1P26436 265 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 IVDP26440 423 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 CD1CP29017 333 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 CSF2RBP32927 897 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 MAGEA6P43360 314 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 FASLGP48023 281 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 CYP4F3Q08477 520 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 DMPKQ09013 629 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 GTF2H3Q13889 308 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 SPIDRQ14159 915 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 AMZ1Q400G9 498 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 LRRC8BQ6P9F7 803 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 C4orf22Q6V702 233 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 ZNF574Q6ZN55 896 aaPredicted RBP8.05□□□□□ -1.12
RDH11-205ENST00000553816 RBM44Q6ZP01 1051 aaKnown RBP8.05□□□□□ -1.12
RDH11-205ENST00000553816 USP53Q70EK8 1073 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 TAS2R42Q7RTR8 314 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 AGGF1Q8N302 714 aaeCLIP8.05□□□□□ -1.12
RDH11-205ENST00000553816 CLDN19Q8N6F1 224 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 MFSD3Q96ES6 412 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 PRR11Q96HE9 360 aaPredicted RBP8.05□□□□□ -1.12
RDH11-205ENST00000553816 TTC25Q96NG3 672 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 DEPDC7Q96QD5 511 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 GFM1Q96RP9 751 aaKnown RBP8.05□□□□□ -1.12
RDH11-205ENST00000553816 NAP1L3Q99457 506 aaPredicted RBP8.05□□□□□ -1.12
RDH11-205ENST00000553816 NUDT22Q9BRQ3 303 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 TBC1D10AQ9BXI6 508 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 TREX1Q9NSU2 369 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 ZDHHC3Q9NYG2 299 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 TMEM9Q9P0T7 183 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 MARCH4Q9P2E8 410 aaPredicted RBP8.05□□□□□ -1.12
RDH11-205ENST00000553816 SAR1BQ9Y6B6 198 aa8.05□□□□□ -1.12
RDH11-205ENST00000553816 CTAGE9A4FU28 777 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 PDZK1P1A8MUH7 402 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 GOLGA8KD6RF30 607 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 GOLGA8TH3BQL2 631 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 OR1I1O60431 355 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 TCEA3O75764 348 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 MPOP05164 745 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 F7P08709 466 aaPredicted RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 HGFP14210 728 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 ATP1B2P14415 290 aaPredicted RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 XRCC1P18887 633 aaPredicted RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 MPSTP25325 297 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 ARNTP27540 789 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 NPY2RP49146 381 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 FNTAP49354 379 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 PRLHRP49683 370 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 UBE2IP63279 158 aaKnown RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 MRPS25P82663 173 aaKnown RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 HHEXQ03014 270 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 CACNG1Q06432 222 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 RTP5Q14D33 572 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 SKIDA1Q1XH10 827 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 GPR33Q49SQ1 333 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 ZNF658BQ4V348 819 aaPredicted RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 BCL7AQ4VC05 210 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 C3orf38Q5JPI3 329 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 PCID2Q5JVF3 399 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 METRNLQ641Q3 311 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 ABRAXAS1Q6UWZ7 409 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 NAPRTQ6XQN6 538 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 SYT10Q6XYQ8 523 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 AMZ2Q86W34 360 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 SLITRK4Q8IW52 837 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 KLHL7Q8IXQ5 586 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 NAT8LQ8N9F0 302 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 KDF1Q8NAX2 398 aaPredicted RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 PPHLN1Q8NEY8 458 aaKnown RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 GPR150Q8NGU9 434 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 OR4L1Q8NH43 312 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 JPH3Q8WXH2 748 aaPredicted RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 ULK4Q96C45 1275 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 LINC00615Q96LM1 132 aaPredicted RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 FCRL3Q96P31 734 aaPredicted RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 COPS8Q99627 209 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 NRTNQ99748 197 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 TRIM51Q9BSJ1 452 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 ZCCHC2Q9C0B9 1178 aaKnown RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 SEMA6CQ9H3T2 930 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 SARS2Q9NP81 518 aaKnown RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 IL1RAPL1Q9NZN1 696 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 BFARQ9NZS9 450 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 CPNE7Q9UBL6 633 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 PCYOX1Q9UHG3 505 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 RIMKLBQ9ULI2 386 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 ZMIZ1Q9ULJ6 1067 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 SATB2Q9UPW6 733 aa8.04□□□□□ -1.12
RDH11-205ENST00000553816 CFAP20Q9Y6A4 193 aaKnown RBP8.04□□□□□ -1.12
RDH11-205ENST00000553816 ZFHX4Q86UP3 3567 aa8.03□□□□□ -1.12
RDH11-205ENST00000553816 KIR2DS5A0A0G2JLQ3 304 aa8.03□□□□□ -1.12
RDH11-205ENST00000553816 A0A0G2JNG1 304 aa8.03□□□□□ -1.12
RDH11-205ENST00000553816 GOLGA6L10A0A0M3HER8 536 aa8.03□□□□□ -1.12
RDH11-205ENST00000553816 MGAT4DA6NG13 374 aa8.03□□□□□ -1.12
RDH11-205ENST00000553816 OR5K4A6NMS3 321 aa8.03□□□□□ -1.12
RDH11-205ENST00000553816 KIR2DS3K7RE56 304 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms