RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 OR4K2Q8NGD2 314 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 GPR150Q8NGU9 434 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 OR6K2Q8NGY2 324 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CXorf40AQ8TE69 158 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 GANCQ8TET4 914 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 SLC44A1Q8WWI5 657 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 HDAC10Q969S8 669 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ULK4Q96C45 1275 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 SIPA1Q96FS4 1042 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF419Q96HQ0 510 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 VPS39Q96JC1 886 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 EAF1Q96JC9 268 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ATP6V1G3Q96LB4 118 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TBATAQ96M53 351 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TSNARE1Q96NA8 513 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 FCRL3Q96P31 734 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 KCNC2Q96PR1 638 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 PLEKHG4BQ96PX9 1271 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 MCCC1Q96RQ3 725 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 PAFAH2Q99487 392 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 IER2Q9BTL4 223 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 RSPH9Q9H1X1 276 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CCDC68Q9H2F9 335 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 LMAN1LQ9HAT1 526 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 FBRSL1Q9HCM7 1045 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 IARS2Q9NSE4 1012 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TREX1Q9NSU2 369 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CATSPERZQ9NTU4 200 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 INTS10Q9NVR2 710 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 PIH1D1Q9NWS0 290 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 OGFRQ9NZT2 677 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 IL17CQ9P0M4 197 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 SUCOQ9UBS9 1254 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CORO1CQ9ULV4 474 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 MMP17Q9ULZ9 603 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 NDRG2Q9UN36 371 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF711Q9Y462 761 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ARL5AQ9Y689 179 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 COMMD10Q9Y6G5 202 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 BRWD1Q9NSI6 2320 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 BRCA2P51587 3418 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 GLYATL1P3A0A0U1RQE8 302 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 SMIM23A6NLE4 172 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 H3BMM5 538 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 AGPSO00116 658 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 QSOX1O00391 747 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 WNT9AO14904 365 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 NARSO43776 548 aaKnown RBP4.97□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF217O75362 1048 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 GJB3O75712 270 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 TM7SF2O76062 418 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 PCDH8O95206 1070 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 SYF2O95926 243 aaKnown RBP4.97□□□□□ -1.61
VTI1B-202ENST00000553619 GOT2P00505 430 aaKnown RBP4.97□□□□□ -1.61
VTI1B-202ENST00000553619 SHBGP04278 402 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 CTSLP07711 333 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 ALPIP09923 528 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 ELFN1P0C7U0 828 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 PIRTP0C851 137 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 ERVK-10P10266 1014 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 CHRNB1P11230 501 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 RALBP11234 206 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 ADRB3P13945 408 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 PNLIPP16233 465 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 TYK2P29597 1187 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 OXTRP30559 389 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 MC4RP32245 332 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 WASP42768 502 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 LEPRP48357 1165 aaKnown RBP4.97□□□□□ -1.61
VTI1B-202ENST00000553619 ARCN1P48444 511 aaKnown RBP4.97□□□□□ -1.61
VTI1B-202ENST00000553619 PSMD8P48556 350 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 CCT5P48643 541 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 TMPRSS15P98073 1019 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 POU4F1Q01851 419 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 SGCGQ13326 291 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 MTM1Q13496 603 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 IHHQ14623 411 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 UBXN2BQ14CS0 331 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 ACOX1Q15067 660 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF284Q2VY69 593 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 CRTC3Q6UUV7 619 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.97□□□□□ -1.61
VTI1B-202ENST00000553619 LIPIQ6XZB0 460 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 TIFABQ6ZNK6 161 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 DPPA4Q7L190 304 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 SYT13Q7L8C5 426 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 TAS2R42Q7RTR8 314 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 SNX20Q7Z614 316 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 PTAR1Q7Z6K3 402 aaPredicted RBP4.97□□□□□ -1.61
VTI1B-202ENST00000553619 STRA8Q7Z7C7 330 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 CNTN4Q8IWV2 1026 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 KRT222Q8N1A0 295 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 TTC30BQ8N4P2 665 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 HDDC3Q8N4P3 179 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF366Q8N895 744 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 NUP43Q8NFH3 380 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 OR13C4Q8NGS5 318 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 OR2W6PQ8NHA6 318 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 RPLP0P6Q8NHW5 317 aa4.97□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF398Q8TD17 642 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms