RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 LIFP15018 202 aa17.56■□□□□ 0.4
PNN-202ENST00000553331 XIAPP98170 497 aa17.56■□□□□ 0.4
PNN-202ENST00000553331 DMPKQ09013 629 aa17.56■□□□□ 0.4
PNN-202ENST00000553331 KLF1Q13351 362 aaPredicted RBP17.56■□□□□ 0.4
PNN-202ENST00000553331 MSLNQ13421 630 aaPredicted RBP17.56■□□□□ 0.4
PNN-202ENST00000553331 PLCL1Q15111 1095 aa17.56■□□□□ 0.4
PNN-202ENST00000553331 ZRANB3Q5FWF4 1079 aa17.56■□□□□ 0.4
PNN-202ENST00000553331 RBM12BQ8IXT5 1001 aaKnown RBP17.56■□□□□ 0.4
PNN-202ENST00000553331 ATG4AQ8WYN0 398 aa17.56■□□□□ 0.4
PNN-202ENST00000553331 ELMO2Q96JJ3 720 aa17.56■□□□□ 0.4
PNN-202ENST00000553331 TEFMQ96QE5 360 aaKnown RBP17.56■□□□□ 0.4
PNN-202ENST00000553331 FBXO8Q9NRD0 319 aa17.56■□□□□ 0.4
PNN-202ENST00000553331 DNMT3AQ9Y6K1 912 aaPredicted RBP17.56■□□□□ 0.4
PNN-202ENST00000553331 MGAQ8IWI9 3026 aa17.56■□□□□ 0.4
PNN-202ENST00000553331 CCDC78A2IDD5 438 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 MGAT4DA6NG13 374 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 POLBP06746 335 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 RALBP11234 206 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 ITGALP20701 1170 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 MC4RP32245 332 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 HADHAP40939 763 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 CAPZBP47756 277 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 ZNF140P52738 457 aaPredicted RBP17.55■□□□□ 0.4
PNN-202ENST00000553331 SH3BP2P78314 561 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 POU6F1Q14863 301 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 SEL1L2Q5TEA6 688 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 CACHD1Q5VU97 1274 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 DUS1LQ6P1R4 473 aaKnown RBP17.55■□□□□ 0.4
PNN-202ENST00000553331 TAS2R42Q7RTR8 314 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 ANP32BQ92688 251 aaKnown RBP17.55■□□□□ 0.4
PNN-202ENST00000553331 ULK4Q96C45 1275 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 ZDHHC12Q96GR4 267 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 ZNF514Q96K75 400 aaPredicted RBP17.55■□□□□ 0.4
PNN-202ENST00000553331 DNAJC1Q96KC8 554 aaKnown RBP17.55■□□□□ 0.4
PNN-202ENST00000553331 C12orf66Q96MD2 445 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 LRRC40Q9H9A6 602 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 FEZ2Q9UHY8 353 aaPredicted RBP17.55■□□□□ 0.4
PNN-202ENST00000553331 ATRXP46100 2492 aa17.55■□□□□ 0.4
PNN-202ENST00000553331 LDB2O43679 373 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 STK17BO94768 372 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 ANKRD34CP0C6C1 535 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 CDKN1CP49918 316 aaPredicted RBP17.54■□□□□ 0.4
PNN-202ENST00000553331 PPP1CAP62136 330 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 P3H1Q32P28 736 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 MEI1Q5TIA1 1274 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 METRNLQ641Q3 311 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 KCTD11Q693B1 232 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 SNX20Q7Z614 316 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 ZNF605Q86T29 641 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 CFAP206Q8IYR0 622 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 UNC5BQ8IZJ1 945 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 NLGN4XQ8N0W4 816 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 NXPE1Q8N323 547 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 NLGN4YQ8NFZ3 816 aaPredicted RBP17.54■□□□□ 0.4
PNN-202ENST00000553331 OR2L2Q8NH16 312 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 SLC35B2Q8TB61 432 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 UBE2Q2Q8WVN8 375 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 OR6C1Q96RD1 312 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 INSM2Q96T92 566 aaPredicted RBP17.54■□□□□ 0.4
PNN-202ENST00000553331 COPS8Q99627 209 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 ZPBPQ9BS86 351 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 ARNT2Q9HBZ2 717 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 PILRAQ9UKJ1 303 aa17.54■□□□□ 0.4
PNN-202ENST00000553331 SMG1Q96Q15 3661 aaKnown RBP17.54■□□□□ 0.4
PNN-202ENST00000553331 CFAP99D6REC4 459 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 PSMD3O43242 534 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 SLC35G4P0C7Q5 338 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 PRSS56P0CW18 603 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 MTHFD1P11586 935 aaKnown RBP17.53■□□□□ 0.4
PNN-202ENST00000553331 LMAN1P49257 510 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 SNX1Q13596 522 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 KRT33BQ14525 404 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 LINC00303Q3SY05 128 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 RASGRP3Q8IV61 690 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 REXO1L1PQ8IX06 675 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 SPDYE1Q8NFV5 336 aaPredicted RBP17.53■□□□□ 0.4
PNN-202ENST00000553331 C1orf54Q8WWF1 131 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 MED8Q96G25 268 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 ALS2CR12Q96Q35 445 aa17.53■□□□□ 0.4
PNN-202ENST00000553331 ZNF768Q9H5H4 540 aaKnown RBP17.53■□□□□ 0.4
PNN-202ENST00000553331 IFNB1P01574 187 aa17.52■□□□□ 0.4
PNN-202ENST00000553331 ATP1B2P14415 290 aaPredicted RBP17.52■□□□□ 0.4
PNN-202ENST00000553331 MAP4P27816 1152 aaKnown RBP17.52■□□□□ 0.4
PNN-202ENST00000553331 TBR1Q16650 682 aa17.52■□□□□ 0.4
PNN-202ENST00000553331 BCL7AQ4VC05 210 aa17.52■□□□□ 0.4
PNN-202ENST00000553331 TIPARPQ7Z3E1 657 aaKnown RBP17.52■□□□□ 0.4
PNN-202ENST00000553331 LILRA3Q8N6C8 439 aaPredicted RBP17.52■□□□□ 0.4
PNN-202ENST00000553331 EXD3Q8N9H8 876 aa17.52■□□□□ 0.4
PNN-202ENST00000553331 KIAA1143Q96AT1 154 aaPredicted RBP17.52■□□□□ 0.4
PNN-202ENST00000553331 ULBP3Q9BZM4 244 aa17.52■□□□□ 0.4
PNN-202ENST00000553331 GPN2Q9H9Y4 310 aaPredicted RBP17.52■□□□□ 0.4
PNN-202ENST00000553331 NLE1Q9NVX2 485 aaPredicted RBP17.52■□□□□ 0.4
PNN-202ENST00000553331 SIDT1Q9NXL6 827 aaKnown RBP17.52■□□□□ 0.4
PNN-202ENST00000553331 ACSL5Q9ULC5 683 aa17.52■□□□□ 0.4
PNN-202ENST00000553331 ZNF148Q9UQR1 794 aa17.52■□□□□ 0.4
PNN-202ENST00000553331 LOC101059948A0A1B0GTJ6 334 aa17.51■□□□□ 0.39
PNN-202ENST00000553331 TOX3O15405 576 aaPredicted RBP17.51■□□□□ 0.39
PNN-202ENST00000553331 SGTAO43765 313 aa17.51■□□□□ 0.39
PNN-202ENST00000553331 AP2A1O95782 977 aa17.51■□□□□ 0.39
PNN-202ENST00000553331 FAM87AP0C7U9 286 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms