RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 OOSP2Q86WS3 158 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 HPS6Q86YV9 775 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 SRRM1Q8IYB3 904 aaKnown RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 IQCKQ8N0W5 287 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 CISD2Q8N5K1 135 aaKnown RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 ZBTB2Q8N680 514 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 RASGEF1AQ8N9B8 481 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 TMEM102Q8N9M5 508 aaPredicted RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 GLIS1Q8NBF1 620 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 OR8K5Q8NH50 307 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 SPATA22Q8NHS9 363 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 CPT1BQ92523 772 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 IMP4Q96G21 291 aaKnown RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 C5orf34Q96MH7 638 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 ZNF830Q96NB3 372 aaPredicted RBP8.86□□□□□ -0.99
SYNE2-209ENST00000553308 LRFN5Q96NI6 719 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 AGAP3Q96P47 875 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 NLNQ9BYT8 704 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 LATS2Q9NRM7 1088 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 LMBRD1Q9NUN5 540 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 HRASLS2Q9NWW9 162 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 SOHLH2Q9NX45 425 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 SLC5A6Q9Y289 635 aa8.86□□□□□ -0.99
SYNE2-209ENST00000553308 DOPEY1Q5JWR5 2465 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 RP1L1Q8IWN7 2480 aaPredicted RBP8.85□□□□□ -0.99
SYNE2-209ENST00000553308 OR6C74A6NCV1 312 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 ANKUB1A6NFN9 424 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 F5H423 210 aaPredicted RBP8.85□□□□□ -0.99
SYNE2-209ENST00000553308 MYO1FO00160 1098 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 NDST3O95803 873 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 MT-CYBP00156 380 aaPredicted RBP8.85□□□□□ -0.99
SYNE2-209ENST00000553308 HNRNPH3P31942 346 aaKnown RBP8.85□□□□□ -0.99
SYNE2-209ENST00000553308 CDK18Q07002 472 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 XRCC4Q13426 336 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 PDK2Q15119 407 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 NOMO1Q15155 1222 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 KYNUQ16719 465 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 PTCHD3Q3KNS1 767 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 ZNF789Q5FWF6 425 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 TMTC4Q5T4D3 741 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 VWA5B1Q5TIE3 1220 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 HGSNATQ68CP4 663 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 ARMC6Q6NXE6 501 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 MED25Q71SY5 747 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 B4GALNT4Q76KP1 1039 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 NT5DC3Q86UY8 548 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 SYTL1Q8IYJ3 562 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 PLD5Q8N7P1 536 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 SPDYE1Q8NFV5 336 aaPredicted RBP8.85□□□□□ -0.99
SYNE2-209ENST00000553308 OR1L3Q8NH93 324 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 NAT14Q8WUY8 206 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 TADA1Q96BN2 335 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 CLIP3Q96DZ5 547 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 TTC25Q96NG3 672 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 INSM2Q96T92 566 aaPredicted RBP8.85□□□□□ -0.99
SYNE2-209ENST00000553308 WWP1Q9H0M0 922 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 CBX8Q9HC52 389 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 IL26Q9NPH9 171 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 PCMTD2Q9NV79 361 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 UBP1Q9NZI7 540 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 BTRCQ9Y297 605 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 ITPR2Q14571 2701 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 CROCCQ5TZA2 2017 aa8.85□□□□□ -0.99
SYNE2-209ENST00000553308 A0A087X0T9 212 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 SLC9B1P1A6NJY1 282 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 TMEM150CB9EJG8 249 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 UGT1A9O60656 530 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 KCNJ13O60928 360 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 PMPCBO75439 489 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 FAM228BP0C875 321 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 UGT1A6P19224 532 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 POLR2CP19387 275 aaPredicted RBP8.84□□□□□ -0.99
SYNE2-209ENST00000553308 POU3F2P20265 443 aaPredicted RBP8.84□□□□□ -0.99
SYNE2-209ENST00000553308 UGT1A1P22309 533 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 UGT1A4P22310 534 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 OTX2P32243 289 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 RRADP55042 308 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 AP1B1Q10567 949 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 NCF4Q15080 339 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 ZFYVE27Q5T4F4 411 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 GPRC6AQ5T6X5 926 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 TMEM220Q6QAJ8 160 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 NPNTQ6UXI9 565 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 FAM151BQ6UXP7 276 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 MRGPREQ86SM8 312 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 MAP7D3Q8IWC1 876 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 BEND7Q8N7W2 519 aaPredicted RBP8.84□□□□□ -0.99
SYNE2-209ENST00000553308 TTC13Q8NBP0 860 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 DDHD1Q8NEL9 900 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 BRSK1Q8TDC3 778 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 RAPGEF5Q92565 580 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 INPP5DQ92835 1189 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 SGSM3Q96HU1 749 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 C12orf66Q96MD2 445 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 RNF157Q96PX1 679 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 ZCCHC2Q9C0B9 1178 aaKnown RBP8.84□□□□□ -0.99
SYNE2-209ENST00000553308 SLC25A51Q9H1U9 297 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 KIR3DX1Q9H7L2 352 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 ACTR5Q9H9F9 607 aaPredicted RBP8.84□□□□□ -0.99
SYNE2-209ENST00000553308 UGT1A7Q9HAW7 530 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms