RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 PQLC1Q8N2U9 271 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 TRAM1L1Q8N609 369 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 CDYL2Q8N8U2 506 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 SNX31Q8N9S9 440 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 SPPL3Q8TCT6 385 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 HCAR2Q8TDS4 363 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 GDPD5Q8WTR4 605 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 UCMAQ8WVF2 138 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 TCEAL4Q96EI5 215 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 FOPNLQ96NB1 174 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 SMIM14Q96QK8 99 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 SLC30A3Q99726 388 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 ZSCAN5AQ9BUG6 496 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 FAM83DQ9H4H8 585 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 NOL11Q9H8H0 719 aaKnown RBP10.06□□□□□ -0.8
CNOT2-243ENST00000553078 BRD9Q9H8M2 597 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 AIG1Q9NVV5 245 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 SMOXQ9NWM0 555 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 THG1LQ9NWX6 298 aaKnown RBP10.06□□□□□ -0.8
CNOT2-243ENST00000553078 DUS2Q9NX74 493 aaKnown RBP10.06□□□□□ -0.8
CNOT2-243ENST00000553078 TRPS1Q9UHF7 1281 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 PPM1HQ9ULR3 514 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 MED16Q9Y2X0 877 aa10.06□□□□□ -0.8
CNOT2-243ENST00000553078 KANSL1LA0AUZ9 987 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 FAM234BA2RU67 622 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 MAGEA13PA6NCF6 341 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 LRRC14BA6NHZ5 514 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 C5orf67F2Z3F1 127 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 PEX1O43933 1283 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 RFPL2O75678 378 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 STK16O75716 305 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 SLC22A3O75751 556 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 ELFN1P0C7U0 828 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 EBLN1P0CF75 366 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 UGT1A6P19224 532 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 UGT1A1P22309 533 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 UGT1A4P22310 534 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 GPX3P22352 226 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 UGT1A3P35503 534 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 UGT1A5P35504 534 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 CCR2P41597 374 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 PSMD8P48556 350 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 HSPA7P48741 367 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 AGTR2P50052 363 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 HNMTP50135 292 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 ERFP50548 548 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
CNOT2-243ENST00000553078 AP1S2P56377 157 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 MRPS22P82650 360 aaKnown RBP10.05□□□□□ -0.8
CNOT2-243ENST00000553078 ELP6Q0PNE2 266 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 PRKG2Q13237 762 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 GTF2H3Q13889 308 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 LRP8Q14114 963 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 BOP1Q14137 746 aaKnown RBP10.05□□□□□ -0.8
CNOT2-243ENST00000553078 TRIM25Q14258 630 aaKnown RBP10.05□□□□□ -0.8
CNOT2-243ENST00000553078 UGT3A2Q3SY77 523 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 SETMARQ53H47 684 aaPredicted RBP10.05□□□□□ -0.8
CNOT2-243ENST00000553078 XKR7Q5GH72 579 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 NEK10Q6ZWH5 1172 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 GRASPQ7Z6J2 395 aaPredicted RBP10.05□□□□□ -0.8
CNOT2-243ENST00000553078 DSG4Q86SJ6 1040 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 TSPAN33Q86UF1 283 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 PHYKPLQ8IUZ5 450 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 C7orf61Q8IZ16 206 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 MCOLN3Q8TDD5 553 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 ATL1Q8WXF7 558 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 SMG7Q92540 1137 aaKnown RBP10.05□□□□□ -0.8
CNOT2-243ENST00000553078 SPDL1Q96EA4 605 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 LMLNQ96KR4 655 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 NR1H4Q96RI1 486 aaPredicted RBP10.05□□□□□ -0.8
CNOT2-243ENST00000553078 KCNA7Q96RP8 456 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 C17orf80Q9BSJ5 609 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 BOCQ9BWV1 1114 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 CD244Q9BZW8 370 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 IPPKQ9H8X2 491 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 SFXN1Q9H9B4 322 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 TNFRSF12AQ9NP84 129 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 SDR39U1Q9NRG7 319 aaPredicted RBP10.05□□□□□ -0.8
CNOT2-243ENST00000553078 ARL15Q9NXU5 204 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 NFKBIL1Q9UBC1 381 aaPredicted RBP10.05□□□□□ -0.8
CNOT2-243ENST00000553078 SNX6Q9UNH7 406 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 CCL26Q9Y258 94 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 AP3M1Q9Y2T2 418 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 WNT6Q9Y6F9 365 aa10.05□□□□□ -0.8
CNOT2-243ENST00000553078 TSPAN11A1L157 253 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 LINC01553A4QN01 128 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 A8MX80 341 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 C1QTNF3-AMACRE9PGA6 284 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 PSMD11O00231 422 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 TXNDC9O14530 226 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 CASQ2O14958 399 aaPredicted RBP10.04□□□□□ -0.8
CNOT2-243ENST00000553078 HOXC11O43248 304 aaPredicted RBP10.04□□□□□ -0.8
CNOT2-243ENST00000553078 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 PRAMEF12O95522 483 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 NPPAP01160 153 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 CAPN1P07384 714 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 C1SP09871 688 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 ALDOCP09972 364 aaKnown RBP10.04□□□□□ -0.8
CNOT2-243ENST00000553078 LINC00271P0C7V0 271 aa10.04□□□□□ -0.8
CNOT2-243ENST00000553078 FCGR1AP12314 374 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms