RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ZNF788Q6ZQV5 615 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 Q6ZSV7 163 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 MEPCEQ7L2J0 689 aaKnown RBP3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 FAM219AQ8IW50 185 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 CNTN4Q8IWV2 1026 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 NEXN-AS1Q8NBZ9 246 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 OR2AK2Q8NG84 335 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 OR2AJ1Q8NGZ0 328 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 ATP6V0A1Q93050 837 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 SLAMF9Q96A28 289 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 LRFN5Q96NI6 719 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 CPNE1Q99829 537 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 SEMA3CQ99985 751 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 UTP14AQ9BVJ6 771 aaKnown RBP3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 LMAN1LQ9HAT1 526 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 TUFT1Q9NNX1 390 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 MYNNQ9NPC7 610 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 MCM9Q9NXL9 1143 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 RHCGQ9UBD6 479 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 POLLQ9UGP5 575 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 NME7Q9Y5B8 376 aa3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 SRPRBQ9Y5M8 271 aaKnown RBP3.96□□□□□ -1.78
LSM6P2-201ENST00000552208 FAM90A10PA6NDY2 464 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 MANSC4A6NHS7 340 aaPredicted RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 SLC33A1O00400 549 aaPredicted RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 XRCC3O43542 346 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 NDUFS7O75251 213 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 EPN2O95208 641 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 VIMP08670 466 aaKnown RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 OR2T7P0C7T2 308 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 ARSBP15848 533 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 EEF1B2P24534 225 aaKnown RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 MPZP25189 248 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 CD27P26842 260 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 CERS1P27544 350 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 RFX5P48382 616 aaPredicted RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 ASCL1P50553 236 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 TAS2R38P59533 333 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 SNRPEP62304 92 aaKnown RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 IL1RL1Q01638 556 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 PRKCZQ05513 592 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 SRSF1Q07955 248 aaKnown RBP eCLIP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 CRYZQ08257 329 aaKnown RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 SLC10A2Q12908 348 aaPredicted RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 TRAF1Q13077 416 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 PPA1Q15181 289 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 UGCGQ16739 394 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 HFEQ30201 348 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 KBTBD12Q3ZCT8 623 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 KCNT1Q5JUK3 1230 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 DCAF12L2Q5VW00 463 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 KCTD18Q6PI47 426 aaPredicted RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 TMEM270Q6UE05 265 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 SLC36A4Q6YBV0 504 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 Q75L30 129 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 ZNF367Q7RTV3 350 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 TLK2Q86UE8 772 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 ZC3HC1Q86WB0 502 aaKnown RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 PM20D2Q8IYS1 436 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 DSELQ8IZU8 1212 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 WFIKKN2Q8TEU8 576 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 HEXDCQ8WVB3 486 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 RAD54LQ92698 747 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 TEKT1Q969V4 418 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 ST6GALNAC6Q969X2 333 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 APOLD1Q96LR9 279 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 TMEM237Q96Q45 408 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 CACNG6Q9BXT2 260 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 XPO4Q9C0E2 1151 aaKnown RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 C17orf75Q9HAS0 396 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 VPS18Q9P253 973 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 ITGA11Q9UKX5 1188 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 COG5Q9UP83 839 aa3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 SPAG9O60271 1321 aaKnown RBP3.95□□□□□ -1.78
LSM6P2-201ENST00000552208 OR2M5A3KFT3 312 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 E5RJQ4 531 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 MS4A18H0YCH9 400 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 H0YGN5 161 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 PLK4O00444 970 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 HS3ST1O14792 307 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 ZBTB43O43298 467 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 SELENOFO60613 162 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 TSPAN1O60635 241 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 CD22P20273 847 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 STX2P32856 288 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 ALDH7A1P49419 539 aaKnown RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 SLC12A3P55017 1021 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 SNU13P55769 128 aaKnown RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 KIAA1024LP59773 190 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 PNRC1Q12796 327 aaPredicted RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 CBX3Q13185 183 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 HNF4GQ14541 408 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 RPS6KA1Q15418 735 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 TTC31Q49AM3 519 aaPredicted RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 DNAJC21Q5F1R6 531 aaKnown RBP3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 WASHC2DQ5SRD0 308 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 NOTUMQ6P988 496 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 PIP4P1Q86T03 277 aa3.94□□□□□ -1.78
LSM6P2-201ENST00000552208 KLHL7Q8IXQ5 586 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms