RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 NDE1Q9NXR1 346 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 STOML1Q9UBI4 398 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 MBD1Q9UIS9 605 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-208ENST00000551338 PTBP2Q9UKA9 531 aaKnown RBP11.33□□□□□ -0.6
RAB5C-208ENST00000551338 ANGPTL2Q9UKU9 493 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 SARDHQ9UL12 918 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 SLC8A2Q9UPR5 921 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 PRRC2BQ5JSZ5 2229 aaKnown RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 HEPACAM2A8MVW5 462 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 EIF3FO00303 357 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 SGTAO43765 313 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 VPS4BO75351 444 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 CRCPO75575 148 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 SNRPB2P08579 225 aaKnown RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 OR56A5P0C7T3 313 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 MPC1LP0DKB6 136 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 ANPEPP15144 967 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 FSHRP23945 695 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 FCARP24071 287 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 AOAHP28039 575 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 CCR7P32248 378 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 MMP12P39900 470 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 HSPA7P48741 367 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 MRPL19P49406 292 aaKnown RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 ACADVLP49748 655 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 ERFP50548 548 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 THOP1P52888 689 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 SESN3P58005 492 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 STX1BP61266 288 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 GTF2H2Q13888 395 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 CEACAM7Q14002 265 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 LRP8Q14114 963 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 ZRSR2Q15696 482 aaKnown RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 CCDC6Q16204 474 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 ZNF423Q2M1K9 1284 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 TCHHL1Q5QJ38 904 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 RARS2Q5T160 578 aaKnown RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 HENMT1Q5T8I9 393 aaKnown RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 GTF2H2CQ6P1K8 395 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 LETMD1Q6P1Q0 360 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 TLDC1Q6P9B6 456 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 AAGABQ6PD74 315 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 PAOXQ6QHF9 649 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 SCIMPQ6UWF3 145 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 LRRC74BQ6ZQY2 392 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 Q6ZVL8 140 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 GET4Q7L5D6 327 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 TECPR1Q7Z6L1 1165 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 TRAM1L1Q8N609 369 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 OR2T11Q8NH01 316 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 HCAR2Q8TDS4 363 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 JADE3Q92613 823 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 SMARCD2Q92925 531 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 SCAMP4Q969E2 229 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 RHBDF1Q96CC6 855 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 TUBGCP3Q96CW5 907 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 CDRT15Q96T59 188 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 APOL5Q9BWW9 433 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 SPATA16Q9BXB7 569 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 NKX2-4Q9H2Z4 354 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 EBF3Q9H4W6 596 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 NSUN3Q9H649 340 aaKnown RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 RDH14Q9HBH5 336 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 S100A14Q9HCY8 104 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 HPS4Q9NQG7 708 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 CACNA2D2Q9NY47 1150 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 CCDC167Q9P0B6 97 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 SUN2Q9UH99 717 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 PPM1HQ9ULR3 514 aa11.32□□□□□ -0.6
RAB5C-208ENST00000551338 TNPO3Q9Y5L0 923 aaKnown RBP11.32□□□□□ -0.6
RAB5C-208ENST00000551338 OTOL1A6NHN0 477 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-208ENST00000551338 EPOPA6NHQ4 379 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 C16orf96A6NNT2 1141 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 FADS2P1A8MWK0 482 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 MRASO14807 208 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 CFLARO15519 480 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 SPINT1O43278 529 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 NUAK1O60285 661 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 MATN4O95460 622 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 GUCA1CO95843 209 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 HGFP14210 728 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 VCLP18206 1134 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 XRCC1P18887 633 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-208ENST00000551338 AKT1P31749 480 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 VHLP40337 213 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 ETV3P41162 512 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 PSME3P61289 254 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 IRX1P78414 480 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-208ENST00000551338 STX5Q13190 355 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 ART3Q13508 389 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 KIF19Q2TAC6 998 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 POM121L1PQ3SYA9 428 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 SULT1C3Q6IMI6 304 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 C8orf82Q6P1X6 216 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-208ENST00000551338 SERPINA13PQ6UXR4 307 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 LIPIQ6XZB0 460 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 HACD2Q6Y1H2 254 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 ADGRG6Q86SQ4 1221 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 CDYL2Q8N8U2 506 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 DCBLD1Q8N8Z6 715 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms