RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 EIF2S3LQ2VIR3 472 aaKnown RBP6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 ATP13A5Q4VNC0 1218 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 CT47A1Q5JQC4 288 aaPredicted RBP6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 CAVIN1Q6NZI2 390 aaKnown RBP6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 TMEM26Q6ZUK4 368 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC9B2Q86UD5 537 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 NT5DC3Q86UY8 548 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 PSTKQ8IV42 348 aaKnown RBP6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 CCDC13Q8IYE1 715 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 BBS5Q8N3I7 341 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 PLD5Q8N7P1 536 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 LMNTD1Q8N9Z9 388 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 TEX19Q8NA77 164 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC38A9Q8NBW4 561 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 GDAP1Q8TB36 358 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 HAUS1Q96CS2 278 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 C19orf60Q96EN9 201 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 STAMBPL1Q96FJ0 436 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 TRIB3Q96RU7 358 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 MAP3K3Q99759 626 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 ACTL8Q9H568 366 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 CTTNBP2NLQ9P2B4 639 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 IP6K2Q9UHH9 426 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 TFR2Q9UP52 801 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF711Q9Y462 761 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 KCTD3Q9Y597 815 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 SCINQ9Y6U3 715 aa6.71□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF106Q9H2Y7 1883 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 LRRD1A4D1F6 860 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CLEC18AA5D8T8 446 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 EIF3CLB5ME19 914 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 MYO1FO00160 1098 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 EIF1AYO14602 144 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 C9P02748 559 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CTSBP07858 339 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CCDC172P0C7W6 258 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 ARAFP10398 606 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 GP1BBP13224 206 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF30P17039 623 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CCNCP24863 283 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 TEAD1P28347 426 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CASP14P31944 242 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 SERPINB6P35237 376 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 GMPRP36959 345 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 FANCCQ00597 558 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 SRSF11Q05519 484 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 KLRB1Q12918 225 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 LRP8Q14114 963 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 PIGHQ14442 188 aaPredicted RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 IQCB1Q15051 598 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CHRNA6Q15825 494 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 IFI16Q16666 785 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF569Q5MCW4 686 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CCDC183Q5T5S1 534 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 ALKBH5Q6P6C2 394 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CLEC18BQ6UXF7 455 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 FAM151BQ6UXP7 276 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF765Q7L2R6 523 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 C11orf96Q7Z7L8 435 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 DAAM2Q86T65 1068 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 TRAPPC5Q8IUR0 188 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 PHYKPLQ8IUZ5 450 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 ESX1Q8N693 406 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 AMER2Q8N7J2 671 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 RASGEF1AQ8N9B8 481 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CLEC18CQ8NCF0 446 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 TEKT4Q8WW24 435 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 GLYATL1Q969I3 302 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 EIF3CQ99613 913 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 FAM118BQ9BPY3 351 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 GPR63Q9BZJ6 419 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 FAM96AQ9H5X1 160 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 ZFYVE1Q9HBF4 777 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CBX8Q9HC52 389 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 LRRC4CQ9HCJ2 640 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 MRPL47Q9HD33 250 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC40A1Q9NP59 571 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 CASS4Q9NQ75 786 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 IMP3Q9NV31 184 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 DONSONQ9NYP3 566 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 PKD2L2Q9NZM6 624 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 ANAPC2Q9UJX6 822 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 HIVEP3Q5T1R4 2406 aa6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 MN1Q10571 1320 aaPredicted RBP6.7□□□□□ -1.34
PRPF40B-214ENST00000551320 SHANK1Q9Y566 2161 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 ABCA12Q86UK0 2595 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 MDC1Q14676 2089 aaKnown RBP6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 A0A1W2PQ67 120 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 OR6C74A6NCV1 312 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 C3orf70A6NLC5 250 aaPredicted RBP6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 EREGO14944 169 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CHUKO15111 745 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF185O15231 689 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 ZW10O43264 779 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CPNE3O75131 537 aaKnown RBP6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CREG1O75629 220 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 POP7O75817 140 aaKnown RBP6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 PROSCO94903 275 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CDK14O94921 469 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 AGFG2O95081 481 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms