RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 OR13J1Q8NGT2 312 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 NAT14Q8WUY8 206 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 PEX13Q92968 403 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 NAF1Q96HR8 494 aaKnown RBP16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 LINC00615Q96LM1 132 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 OSBPL9Q96SU4 736 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 ACSL5Q9ULC5 683 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 SDK2Q58EX2 2172 aa16.89■□□□□ 0.29
CHMP1A-208ENST00000550102 GOLGA6L10A0A0M3HER8 536 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 CCDC162PA2VCL2 907 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 NVLO15381 856 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 UBXN7O94888 489 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 PRSS56P0CW18 603 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 MTHFD1P11586 935 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 MPSTP25325 297 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 ITPKBP27987 946 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 SLC5A2P31639 672 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 FOXN2P32314 431 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 CSTF2P33240 577 aaKnown RBP eCLIP16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 ETV5P41161 510 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 MAPK10P53779 464 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 TLE3Q04726 772 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 ACVR1Q04771 509 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 ITIH4Q14624 930 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 CLCA4Q14CN2 919 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 RPE65Q16518 533 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 BROXQ5VW32 411 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 MICALCLQ6ZW33 695 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 PLXDC1Q8IUK5 500 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 GPR150Q8NGU9 434 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 MAGOHBQ96A72 148 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 AP1M1Q9BXS5 423 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 DPH1Q9BZG8 443 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 WWP1Q9H0M0 922 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 IMP3Q9NV31 184 aaKnown RBP16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 PDP2Q9P2J9 529 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 ACSL6Q9UKU0 697 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 SNX12Q9UMY4 172 aa16.88■□□□□ 0.29
CHMP1A-208ENST00000550102 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 OR51F1A6NGY5 319 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 CES2O00748 559 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 AP2A2O94973 939 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 GSTM1P09488 218 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 TPSB2P20231 275 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 CAPZBP47756 277 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 VPS41P49754 854 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 SESN2P58004 480 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 PRAMEP78395 509 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 GSTM4Q03013 218 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 GPS1Q13098 491 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 TRIP13Q15645 432 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 TPSAB1Q15661 275 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 CYP1B1Q16678 543 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 SNAP47Q5SQN1 464 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 TTC27Q6P3X3 843 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 PACS1Q6VY07 963 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 ACTRT1Q8TDG2 376 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 COG1Q8WTW3 980 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 HDAC10Q969S8 669 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 C12orf66Q96MD2 445 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 IL22Q9GZX6 179 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 SMARCAL1Q9NZC9 954 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 OGFRQ9NZT2 677 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 SLC2A6Q9UGQ3 507 aa16.87■□□□□ 0.29
CHMP1A-208ENST00000550102 PRAMEF33A0A0G2JMD5 474 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 C17orf113A0A1B0GUU1 675 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 QSOX1O00391 747 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 KLK10O43240 276 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 PRAMEF10O60809 474 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 GOT2P00505 430 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 TYRP1P17643 537 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 AMD1P17707 334 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 NSG1P42857 185 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 UCNP55089 124 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 PLCL1Q15111 1095 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 TMEM164Q5U3C3 297 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 LYPLAL1Q5VWZ2 237 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 FAM129CQ86XR2 697 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 CLDN19Q8N6F1 224 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 OR6P1Q8NGX9 317 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 RSC1A1Q92681 617 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 RMDN2Q96LZ7 410 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 ZNF778Q96MU6 729 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 TTC1Q99614 292 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 CCM2Q9BSQ5 444 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 B3GNT4Q9C0J1 378 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 COG4Q9H9E3 785 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 BFARQ9NZS9 450 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 KLHL3Q9UH77 587 aa16.86■□□□□ 0.29
CHMP1A-208ENST00000550102 USP27XA6NNY8 438 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 A8MU76 341 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 PHF2O75151 1096 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 KRT14P02533 472 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 FTH1P02794 183 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 ANKRD34CP0C6C1 535 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 CCL4P13236 92 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 COILP38432 576 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 MAGEA6P43360 314 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 FNTAP49354 379 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 GFERP55789 205 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms