RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 APMAPQ9HDC9 416 aa11.56□□□□□ -0.56
LETMD1-221ENST00000550100 ZDHHC3Q9NYG2 299 aa11.56□□□□□ -0.56
LETMD1-221ENST00000550100 CRLS1Q9UJA2 301 aa11.56□□□□□ -0.56
LETMD1-221ENST00000550100 ACSL6Q9UKU0 697 aa11.56□□□□□ -0.56
LETMD1-221ENST00000550100 B3GALT1Q9Y5Z6 326 aa11.56□□□□□ -0.56
LETMD1-221ENST00000550100 CFAP46Q8IYW2 2715 aa11.56□□□□□ -0.56
LETMD1-221ENST00000550100 USP27XA6NNY8 438 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 ZNF189O75820 626 aaPredicted RBP11.55□□□□□ -0.56
LETMD1-221ENST00000550100 UBXN7O94888 489 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 C9P02748 559 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 ATP1B2P14415 290 aaPredicted RBP11.55□□□□□ -0.56
LETMD1-221ENST00000550100 SLC2A4P14672 509 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 PDHA2P29803 388 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 FOXN2P32314 431 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 FDFT1P37268 417 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 HADHAP40939 763 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 PRLHRP49683 370 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 TERF1P54274 439 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 CXADRP78310 365 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 PDE1BQ01064 536 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 TRIP13Q15645 432 aaPredicted RBP11.55□□□□□ -0.56
LETMD1-221ENST00000550100 LONRF2Q1L5Z9 754 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 ARHGAP40Q5TG30 622 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 ANKS6Q68DC2 871 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 CAPRIN2Q6IMN6 1127 aaKnown RBP11.55□□□□□ -0.56
LETMD1-221ENST00000550100 NAPRTQ6XQN6 538 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 TAS2R42Q7RTR8 314 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 VASH2Q86V25 355 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 RASGEF1CQ8N431 466 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 AGBL5Q8NDL9 886 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 COG1Q8WTW3 980 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 UBE2Q2Q8WVN8 375 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 HDAC10Q969S8 669 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 TMEM159Q96B96 161 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 FCRL3Q96P31 734 aaPredicted RBP11.55□□□□□ -0.56
LETMD1-221ENST00000550100 COPS8Q99627 209 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 CTRCQ99895 268 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 C19orf43Q9BQ61 176 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 SPRY4Q9C004 299 aa11.55□□□□□ -0.56
LETMD1-221ENST00000550100 ZCCHC2Q9C0B9 1178 aaKnown RBP11.55□□□□□ -0.56
LETMD1-221ENST00000550100 TRMT1Q9NXH9 659 aaKnown RBP11.55□□□□□ -0.56
LETMD1-221ENST00000550100 MN1Q10571 1320 aaPredicted RBP11.55□□□□□ -0.56
LETMD1-221ENST00000550100 GOLGA6L3A6NEY3 463 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 CAPN5O15484 640 aaPredicted RBP11.54□□□□□ -0.56
LETMD1-221ENST00000550100 OR1I1O60431 355 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 KCNJ13O60928 360 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 APRTP07741 180 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 SPTBP11277 2137 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 MTHFD1P11586 935 aaKnown RBP11.54□□□□□ -0.56
LETMD1-221ENST00000550100 ITGALP20701 1170 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 PPM1FP49593 454 aaPredicted RBP11.54□□□□□ -0.56
LETMD1-221ENST00000550100 CACNG1Q06432 222 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 CDH17Q12864 832 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 GPR33Q49SQ1 333 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 TSTD2Q5T7W7 516 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 CERS6Q6ZMG9 384 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 LDB1Q86U70 411 aaPredicted RBP11.54□□□□□ -0.56
LETMD1-221ENST00000550100 TRIM48Q8IWZ4 208 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 SLC35F6Q8N357 371 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 CCDC89Q8N998 374 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 DNAAF3Q8N9W5 541 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 PHC3Q8NDX5 983 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 ULK4Q96C45 1275 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 CXorf40BQ96DE9 158 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 C9orf72Q96LT7 481 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 PPM1MQ96MI6 270 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 TGM7Q96PF1 710 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 TAAR9Q96RI9 348 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 DPYSL5Q9BPU6 564 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 AP1M1Q9BXS5 423 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.54□□□□□ -0.56
LETMD1-221ENST00000550100 CHRAC1Q9NRG0 131 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 SIDT1Q9NXL6 827 aaKnown RBP11.54□□□□□ -0.56
LETMD1-221ENST00000550100 SLC39A1Q9NY26 324 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 PAK5Q9P286 719 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 MARCH4Q9P2E8 410 aaPredicted RBP11.54□□□□□ -0.56
LETMD1-221ENST00000550100 NEU2Q9Y3R4 380 aa11.54□□□□□ -0.56
LETMD1-221ENST00000550100 FASNP49327 2511 aaKnown RBP11.54□□□□□ -0.56
LETMD1-221ENST00000550100 ERI2A8K979 691 aaKnown RBP11.53□□□□□ -0.56
LETMD1-221ENST00000550100 ZNF185O15231 689 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 ZW10O43264 779 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 GOT2P00505 430 aaKnown RBP11.53□□□□□ -0.56
LETMD1-221ENST00000550100 VCLP18206 1134 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 ADRA1DP25100 572 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 MSNP26038 577 aaKnown RBP11.53□□□□□ -0.56
LETMD1-221ENST00000550100 CSTF2P33240 577 aaKnown RBP eCLIP11.53□□□□□ -0.56
LETMD1-221ENST00000550100 PREPP48147 710 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 ARCN1P48444 511 aaKnown RBP11.53□□□□□ -0.56
LETMD1-221ENST00000550100 SESN2P58004 480 aaPredicted RBP11.53□□□□□ -0.56
LETMD1-221ENST00000550100 SH3BP2P78314 561 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 MC2RQ01718 297 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 ACVR1Q04771 509 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 ANKRD22Q5VYY1 191 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 PPP1R21Q6ZMI0 780 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 FAM92BQ6ZTR7 304 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 TIPARPQ7Z3E1 657 aaKnown RBP11.53□□□□□ -0.56
LETMD1-221ENST00000550100 LINC00523Q86TU6 105 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 FAM129CQ86XR2 697 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 SPNS2Q8IVW8 549 aa11.53□□□□□ -0.56
LETMD1-221ENST00000550100 DCUN1D1Q96GG9 259 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms