RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 TCAF1Q9Y4C2 921 aa15.58■□□□□ 0.08
DDX54-204ENST00000546898 MN1Q10571 1320 aaPredicted RBP15.58■□□□□ 0.08
DDX54-204ENST00000546898 UBXN7O94888 489 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 AP2A2O94973 939 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 ITIH1P19827 911 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 SLC5A2P31639 672 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 FOXN2P32314 431 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 CSTF2P33240 577 aaKnown RBP eCLIP15.57■□□□□ 0.08
DDX54-204ENST00000546898 NSG1P42857 185 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 MAPK9P45984 424 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 CDKN1CP49918 316 aaPredicted RBP15.57■□□□□ 0.08
DDX54-204ENST00000546898 ARSDP51689 593 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 GPR18Q14330 331 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 RPE65Q16518 533 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 DBN1Q16643 649 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 CYP1B1Q16678 543 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 AFTPHQ6ULP2 937 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 JAMLQ86YT9 394 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 PLXDC1Q8IUK5 500 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 SPACA3Q8IXA5 215 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 PIANPQ8IYJ0 282 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 ACTRT1Q8TDG2 376 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 NCSTNQ92542 709 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 OSBPL9Q96SU4 736 aa15.57■□□□□ 0.08
DDX54-204ENST00000546898 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.56■□□□□ 0.08
DDX54-204ENST00000546898 CCDC78A2IDD5 438 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 CCDC162PA2VCL2 907 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 C9P02748 559 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 ANKRD34CP0C6C1 535 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 SLC35G4P0C7Q5 338 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 PRSS56P0CW18 603 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 MTHFD1P11586 935 aaKnown RBP15.56■□□□□ 0.08
DDX54-204ENST00000546898 CD82P27701 267 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 ITPKBP27987 946 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 ETV5P41161 510 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 CAPZBP47756 277 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 MAPK10P53779 464 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 UCNP55089 124 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 TLE3Q04726 772 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 PCID2Q5JVF3 399 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 TMEM164Q5U3C3 297 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 BROXQ5VW32 411 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 LYPLAL1Q5VWZ2 237 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 PACS1Q6VY07 963 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 ARHGAP22Q7Z5H3 698 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 GPR150Q8NGU9 434 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 ZFPM2Q8WW38 1151 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 MAGOHBQ96A72 148 aaKnown RBP15.56■□□□□ 0.08
DDX54-204ENST00000546898 SGSM3Q96HU1 749 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 MS4A14Q96JA4 679 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 TTC1Q99614 292 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 CCM2Q9BSQ5 444 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 IL22Q9GZX6 179 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 WWP1Q9H0M0 922 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 TRMT1Q9NXH9 659 aaKnown RBP15.56■□□□□ 0.08
DDX54-204ENST00000546898 OGFRQ9NZT2 677 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 SNX12Q9UMY4 172 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 PSMD13Q9UNM6 376 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 SDK2Q58EX2 2172 aa15.56■□□□□ 0.08
DDX54-204ENST00000546898 GOLGA6L10A0A0M3HER8 536 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 B4E171 279 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 TOX3O15405 576 aaPredicted RBP15.55■□□□□ 0.08
DDX54-204ENST00000546898 GOT2P00505 430 aaKnown RBP15.55■□□□□ 0.08
DDX54-204ENST00000546898 AMD1P17707 334 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 MPSTP25325 297 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 TSPAN7P41732 249 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 MAGEA6P43360 314 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 NPY2RP49146 381 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 PRAMEP78395 509 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 ARMC3Q5W041 872 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 TTC27Q6P3X3 843 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 XKR5Q6UX68 686 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 CERS6Q6ZMG9 384 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 NAT14Q8WUY8 206 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 HDAC10Q969S8 669 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 NAF1Q96HR8 494 aaKnown RBP15.55■□□□□ 0.08
DDX54-204ENST00000546898 RAB33BQ9H082 229 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 COG4Q9H9E3 785 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 IMP3Q9NV31 184 aaKnown RBP15.55■□□□□ 0.08
DDX54-204ENST00000546898 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.55■□□□□ 0.08
DDX54-204ENST00000546898 BFARQ9NZS9 450 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 SLC2A6Q9UGQ3 507 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 PCDHGA3Q9Y5H0 932 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 HEBP2Q9Y5Z4 205 aa15.55■□□□□ 0.08
DDX54-204ENST00000546898 PRAMEF33A0A0G2JMD5 474 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 OR51F1A6NGY5 319 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 F8W8V4 182 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 KLK10O43240 276 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 PRAMEF10O60809 474 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 PHF2O75151 1096 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 KRT14P02533 472 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 LIPCP11150 499 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 FGF3P11487 239 aaPredicted RBP15.54■□□□□ 0.08
DDX54-204ENST00000546898 CCL4P13236 92 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 TCP1P17987 556 aaKnown RBP15.54■□□□□ 0.08
DDX54-204ENST00000546898 NDUFS1P28331 727 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 PPARGP37231 505 aaPredicted RBP15.54■□□□□ 0.08
DDX54-204ENST00000546898 COILP38432 576 aaPredicted RBP15.54■□□□□ 0.08
DDX54-204ENST00000546898 FNTAP49354 379 aa15.54■□□□□ 0.08
DDX54-204ENST00000546898 SESN2P58004 480 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms