RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 FADS3Q9Y5Q0 445 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 KLHL33A6NCF5 533 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 QSOX1O00391 747 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 STX16O14662 325 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 ATP6V1G1O75348 118 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 S1PR4O95977 384 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 COL6A1P12109 1028 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 NUP62P37198 522 aaPredicted RBP5.71□□□□□ -1.49
VPS50-220ENST00000544910 CSKP41240 450 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 MAPK10P53779 464 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 HSPA14Q0VDF9 509 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 XKR6Q5GH73 641 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 GPR107Q5VW38 600 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 KLHDC10Q6PID8 442 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 NUDT18Q6ZVK8 323 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 SNX20Q7Z614 316 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 SVOPLQ8N434 492 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 AMER2Q8N7J2 671 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 OR7A2PQ8NGA2 310 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 ZFAND2BQ8WV99 257 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 KIAA1191Q96A73 305 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 L3HYPDHQ96EM0 354 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 MOCOSQ96EN8 888 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 ADI1Q9BV57 179 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 ZCCHC2Q9C0B9 1178 aaKnown RBP5.71□□□□□ -1.49
VPS50-220ENST00000544910 NMUR1Q9HB89 426 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 ASAH2Q9NR71 780 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 SELENONQ9NZV5 590 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 SH3BP4Q9P0V3 963 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 C3orf18Q9UK00 162 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 MTMR11A4FU01 709 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 CDH1P12830 882 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 GLDCP23378 1020 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 USP46P62068 366 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 PIGGQ5H8A4 983 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 KIAA0319Q5VV43 1072 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 HACD2Q6Y1H2 254 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 CNTN4Q8IWV2 1026 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 SFRP1Q8N474 314 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 MINDY2Q8NBR6 621 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 HM13Q8TCT9 377 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 RASSF5Q8WWW0 418 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 KHSRPQ92945 711 aaKnown RBP eCLIP5.71□□□□□ -1.498e-7■■■□□ 18.8
VPS50-220ENST00000544910 PEX13Q92968 403 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 IGSF8Q969P0 613 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 COPS8Q99627 209 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 RBM4BQ9BQ04 359 aaKnown RBP5.71□□□□□ -1.49
VPS50-220ENST00000544910 RBM4Q9BWF3 364 aaKnown RBP5.71□□□□□ -1.49
VPS50-220ENST00000544910 REEP1Q9H902 201 aa5.71□□□□□ -1.49
VPS50-220ENST00000544910 ARID2Q68CP9 1835 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 MEIS3P2A8K0S8 358 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 HAS3O00219 553 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 ZNF623O75123 536 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 H6PDO95479 791 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 MTHFD1P11586 935 aaKnown RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 HOXD8P13378 290 aaPredicted RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 KCNQ1P51787 676 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 ACSM2AQ08AH3 577 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 PWP1Q13610 501 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 MAPK11Q15759 364 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 SETMARQ53H47 684 aaPredicted RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 PAGE2BQ5JRK9 111 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 ATXN7L2Q5T6C5 722 aaPredicted RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 ACSM2BQ68CK6 577 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 KLHL17Q6TDP4 642 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 SPESP1Q6UW49 350 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 ZUFSPQ96AP4 578 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 PPM1MQ96MI6 270 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 CIPCQ9C0C6 399 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 C20orf27Q9GZN8 174 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 RETREG1Q9H6L5 497 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 CSNK1G1Q9HCP0 422 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 SAMD4AQ9UPU9 718 aaKnown RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 ELOVL7A1L3X0 281 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 GRID2O43424 1007 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 RNASEH1O60930 286 aaKnown RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 UGT2B11O75310 529 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 NIPSNAP2O75323 286 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 TRMUO75648 421 aaKnown RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 SORBS2O94875 1100 aaKnown RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 IL6P05231 212 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 GM2AP17900 193 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 GABRR2P28476 465 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 PGGT1BP53609 377 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 TUBA1BP68363 451 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 IRF8Q02556 426 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 PRKCQQ04759 706 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 CYP4F3Q08477 520 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 UNC50Q53HI1 259 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 THOC7Q6I9Y2 204 aaKnown RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 PAQR9Q6ZVX9 377 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 TUBA1AQ71U36 451 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 ERMP1Q7Z2K6 904 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 TRMT11Q7Z4G4 463 aaKnown RBP5.71□□□□□ -1.5
VPS50-220ENST00000544910 GOLGA7Q7Z5G4 137 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 GPR180Q86V85 440 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 SYTL1Q8IYJ3 562 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 GRPEL2Q8TAA5 225 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 SPPL2AQ8TCT8 520 aa5.71□□□□□ -1.5
VPS50-220ENST00000544910 OTULINQ96BN8 352 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms