RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 KIAA1211LQ6NV74 962 aa13.46□□□□□ -0.26
HCFC2-202ENST00000544223 ACAD11Q709F0 780 aa13.46□□□□□ -0.26
HCFC2-202ENST00000544223 RAB44Q7Z6P3 723 aaPredicted RBP13.46□□□□□ -0.26
HCFC2-202ENST00000544223 RNF148Q8N7C7 305 aa13.46□□□□□ -0.26
HCFC2-202ENST00000544223 RASGEF1AQ8N9B8 481 aa13.46□□□□□ -0.26
HCFC2-202ENST00000544223 PLA2G15Q8NCC3 412 aa13.46□□□□□ -0.26
HCFC2-202ENST00000544223 SUSD6Q92537 303 aa13.46□□□□□ -0.26
HCFC2-202ENST00000544223 MCUR1Q96AQ8 359 aa13.46□□□□□ -0.26
HCFC2-202ENST00000544223 LMAN2LQ9H0V9 348 aa13.46□□□□□ -0.26
HCFC2-202ENST00000544223 SPATS2LQ9NUQ6 558 aaKnown RBP13.46□□□□□ -0.26
HCFC2-202ENST00000544223 NKX1-2Q9UD57 310 aaPredicted RBP13.46□□□□□ -0.26
HCFC2-202ENST00000544223 GOLGA4Q13439 2230 aaKnown RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 KIAA1549LQ6ZVL6 1849 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 TSPAN6O43657 245 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 CCNT2O60583 730 aaKnown RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 ATP5HO75947 161 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 RECQL5O94762 991 aaPredicted RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 ALDOCP09972 364 aaKnown RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 CYP2A6P11509 494 aaPredicted RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 COX4I1P13073 169 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 ADRB3P13945 408 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 CD72P21854 359 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 RPS3P23396 243 aaKnown RBP eCLIP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 PGM1P36871 562 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 GALK1P51570 392 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 PDGFRLQ15198 375 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 LETMD1Q6P1Q0 360 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 MACC1Q6ZN28 852 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 TECPR1Q7Z6L1 1165 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 MYLK4Q86YV6 388 aaPredicted RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 MYO1HQ8N1T3 1032 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 ZNF557Q8N988 423 aaPredicted RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 AGAP11Q8TF27 550 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 TWIST2Q8WVJ9 160 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 CCDC124Q96CT7 223 aaKnown RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 C19orf60Q96EN9 201 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 TTC1Q99614 292 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 NRTNQ99748 197 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 SIKE1Q9BRV8 207 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 AKTIPQ9H8T0 292 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 TRPV4Q9HBA0 871 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 PLXNA2O75051 1894 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 EDDM13A0A1B0GTR0 161 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 STX16-NPEPL1H3BU86 382 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 FFAR3O14843 346 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 AZIN1O14977 448 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 SCAMP1O15126 338 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 MID1O15344 667 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 GPR42O15529 346 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 SOD1P00441 154 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 ASLP04424 464 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 RPS17P08708 135 aaKnown RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 PDHA2P29803 388 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 P2RY2P41231 377 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 ATXN3P54252 364 aaPredicted RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 ELAVL3Q14576 367 aaKnown RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 KPNB1Q14974 876 aaKnown RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 NAA25Q14CX7 972 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 ANKS6Q68DC2 871 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 DPPA4Q7L190 304 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 CPA6Q8N4T0 437 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 WFIKKN2Q8TEU8 576 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 OR8D1Q8WZ84 308 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 ELMO1Q92556 727 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 PPP2R3CQ969Q6 453 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 NPAS2Q99743 824 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 TRMT61BQ9BVS5 477 aaKnown RBP13.45□□□□□ -0.26
HCFC2-202ENST00000544223 CD93Q9NPY3 652 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 CCDC167Q9P0B6 97 aa13.45□□□□□ -0.26
HCFC2-202ENST00000544223 PEX11AO75192 247 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 C6P13671 934 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 PPARGP37231 505 aaPredicted RBP13.44□□□□□ -0.26
HCFC2-202ENST00000544223 HTR6P50406 440 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 ERVPABLB-1P60509 514 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 ABRQ12979 859 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 LCP2Q13094 533 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 E2F5Q15329 346 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 TCEA2Q15560 299 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 CCDC85BQ15834 202 aaPredicted RBP13.44□□□□□ -0.26
HCFC2-202ENST00000544223 CCSMST1Q4G0I0 132 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 TMEM31Q5JXX7 168 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 ERAP2Q6P179 960 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 AADATQ8N5Z0 425 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 ZNF513Q8N8E2 541 aaPredicted RBP13.44□□□□□ -0.26
HCFC2-202ENST00000544223 MTFMTQ96DP5 389 aaKnown RBP13.44□□□□□ -0.26
HCFC2-202ENST00000544223 DCUN1D1Q96GG9 259 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 CDCA3Q99618 268 aaPredicted RBP13.44□□□□□ -0.26
HCFC2-202ENST00000544223 C1orf50Q9BV19 199 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 MEAF6Q9HAF1 191 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 VTI1BQ9UEU0 232 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 TMEM98Q9Y2Y6 226 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 ZFC3H1O60293 1989 aaKnown RBP13.44□□□□□ -0.26
HCFC2-202ENST00000544223 SYCE1LA8MT33 242 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 ARNTLO00327 626 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 CRCPO75575 148 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 MSH3P20585 1137 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 DGKAP23743 735 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 RASSF2P50749 326 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 COPAP53621 1224 aa13.44□□□□□ -0.26
HCFC2-202ENST00000544223 HABP4Q5JVS0 413 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms