RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 CILPO75339 1184 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CYP7B1O75881 506 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 PAPSS2O95340 614 aaPredicted RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 C4BPAP04003 597 aaKnown RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ARL2P36404 184 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 PTGIRP43119 386 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CRATP43155 626 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 UCNP55089 124 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 TAS2R43P59537 309 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CAP1Q01518 475 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ATP1A4Q13733 1029 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 LARS2Q15031 903 aaKnown RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 C9orf57Q5W0N0 161 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ANO7Q6IWH7 933 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 MSANTD1Q6ZTZ1 278 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 DNAAF5Q86Y56 855 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF420Q8TAQ5 688 aaPredicted RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 FAM105AQ9NUU6 356 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 DNAJB9Q9UBS3 223 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 PCDHGB6Q9Y5F9 930 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 KLHL33A6NCF5 533 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 FADS2P1A8MWK0 482 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 H3BN98 237 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 THRBP10828 461 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 BMP4P12644 408 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 SLC6A2P23975 617 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 DNAJB13P59910 316 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 SCN1BQ07699 218 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 PTCHD4Q6ZW05 846 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CHST9Q7L1S5 443 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ANKS1BQ7Z6G8 1248 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ADGRA1Q86SQ6 560 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 LRRC57Q8N9N7 239 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CCDC107Q8WV48 283 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 KCTD15Q96SI1 283 aaPredicted RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 FAM118BQ9BPY3 351 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 KIFC1Q9BW19 673 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CHID1Q9BWS9 393 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF446Q9NWS9 450 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 TRIM43BA6NCK2 446 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 SHISA7A6NL88 538 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 TRIM3O75382 744 aaPredicted RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CCNB2O95067 398 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CLDN9O95484 217 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 RAP2AP10114 183 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 HOXB2P14652 356 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 BMP7P18075 431 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ID4P47928 161 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 DGKGP49619 791 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 NEDD8Q15843 81 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 LPAL2Q16609 132 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ATP13A5Q4VNC0 1218 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CPTPQ5TA50 214 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 APOBEC3HQ6NTF7 200 aaKnown RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF783Q6ZMS7 281 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 C12orf66Q96MD2 445 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 PGLYRP2Q96PD5 576 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 GPATCH1Q9BRR8 931 aaKnown RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 SLC25A51Q9H1U9 297 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 LMAN1LQ9HAT1 526 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 MARCH2Q9P0N8 246 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 TRAF6Q9Y4K3 522 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 PCDHGA4Q9Y5G9 962 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 MAFBQ9Y5Q3 323 aaPredicted RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 MATN3O15232 486 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 SLC25A12O75746 678 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 L1CAMP32004 1257 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CLK2P49760 499 aaKnown RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 CNTN2Q02246 1040 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 FAPQ12884 760 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 SEMA5AQ13591 1074 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 RNASEH2BQ5TBB1 312 aaKnown RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 HECTD2Q5U5R9 776 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF776Q68DI1 518 aaPredicted RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 KIAA0930Q6ICG6 404 aaPredicted RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 UNC5AQ6ZN44 842 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 FAM20CQ8IXL6 584 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 PIGXQ8TBF5 258 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ZFAND2BQ8WV99 257 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 HAS1Q92839 578 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 OMA1Q96E52 524 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 SENP8Q96LD8 212 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 SEPHS2Q99611 448 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 HSD17B14Q9BPX1 270 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 IER2Q9BTL4 223 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ADAMTS10Q9H324 1103 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 RNPEPQ9H4A4 650 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 ALG9Q9H6U8 611 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 LRRC4CQ9HCJ2 640 aa7.73□□□□□ -1.17
VPS13D-211ENST00000543710 TSR3Q9UJK0 312 aaKnown RBP7.73□□□□□ -1.17
VPS13D-211ENST00000543710 PDLIM1O00151 329 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 SSNA1O43805 119 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 HSMCR30P0CW71 290 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ATP5A1P25705 553 aaKnown RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 SSTR1P30872 391 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 HNF4AP41235 474 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 CD86P42081 329 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 GABARAPL2P60520 117 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 LIPEQ05469 1076 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF33BQ06732 778 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms