RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SLC39A4Q6P5W5 647 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 KRT74Q7RTS7 529 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 FGD2Q7Z6J4 655 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 DCAF4L2Q8NA75 395 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 TSEN2Q8NCE0 465 aaKnown RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF563Q8TA94 476 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ITCHQ96J02 903 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ASB16Q96NS5 453 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 APOL4Q9BPW4 351 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 ZSCAN5AQ9BUG6 496 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 IPPKQ9H8X2 491 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 SPATA6Q9NWH7 488 aaPredicted RBP6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 TRAF6Q9Y4K3 522 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 LYVE1Q9Y5Y7 322 aa6.82□□□□□ -1.32
SRGAP1-206ENST00000543397 KLHL33A6NCF5 533 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PIRO00625 290 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 TEX28O15482 410 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PRKCGP05129 697 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 BMP7P18075 431 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 MYL12AP19105 171 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CTSOP43234 321 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ASMTP46597 345 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 AVPR1BP47901 424 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 HSPA7P48741 367 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 TAS2R50P59544 299 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 MPP1Q00013 466 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ARMC4Q5T2S8 1044 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 HFE2Q6ZVN8 426 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CUZD1Q86UP6 607 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ADHFE1Q8IWW8 467 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 DNAJB14Q8TBM8 379 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC35F5Q8WV83 523 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 FCRL5Q96RD9 977 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 RIOK2Q9BVS4 552 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 YIPF3Q9GZM5 350 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 NSUN3Q9H649 340 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 EQTNQ9NQ60 294 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 IGSF9Q9P2J2 1179 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 REXO2Q9Y3B8 237 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 POLR3HQ9Y535 204 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 HS3ST4Q9Y661 456 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 DLG5Q8TDM6 1919 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 UPK3BL1B0FP48 263 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 UPK3BL2E5RIL1 263 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC28A2O43868 658 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PGM3O95394 542 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ITGA2P17301 1181 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 GNAZP19086 355 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 TNFRSF8P28908 595 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PNLIPRP1P54315 467 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC10A7Q0GE19 358 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CHIT1Q13231 466 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 EML3Q32P44 896 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CORO6Q6QEF8 472 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ATG14Q6ZNE5 492 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CPNE9Q8IYJ1 553 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 AADATQ8N5Z0 425 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SETD9Q8NE22 299 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 S100A13Q99584 98 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 EPS8L2Q9H6S3 715 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 NEK6Q9HC98 313 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 LRRC4CQ9HCJ2 640 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 COPS7AQ9UBW8 275 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PTBP2Q9UKA9 531 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 C4BP0C0L5 1744 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 COL2A1P02458 1487 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 TULP2O00295 520 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 TOR1BO14657 336 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SMAD9O15198 467 aaKnown RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 AP1G1O43747 822 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 NUDT17P0C025 328 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CCNYL3P0C7X3 344 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC6A2P23975 617 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 EPHA3P29320 983 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 MAPK12P53778 367 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 INCA1Q0VD86 236 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 MYLK3Q32MK0 819 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 PHF19Q5T6S3 580 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 C22orf39Q6P5X5 142 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC22A25Q6T423 547 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 GALNT7Q86SF2 657 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 LRRTM4Q86VH4 590 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 C10orf107Q8IVU9 208 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 RASGEF1CQ8N431 466 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SMARCD2Q92925 531 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 DPYSL5Q9BPU6 564 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 LRTM1Q9HBL6 345 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC40A1Q9NP59 571 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CRTAC1Q9NQ79 661 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 OSER1Q9NX31 292 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 SAGE1Q9NXZ1 904 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 MAT2BQ9NZL9 334 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 HCN3Q9P1Z3 774 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ANAPC2Q9UJX6 822 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 MCIDASD6RGH6 385 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 HCRTO43612 131 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 ACADSP16219 412 aa6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CDH5P33151 784 aaPredicted RBP6.81□□□□□ -1.32
SRGAP1-206ENST00000543397 CHRNA4P43681 627 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms