RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 CTSCP53634 463 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 RWDD2BP57060 319 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 EIF3EP60228 445 aaKnown RBP12.85□□□□□ -0.35
RTN3-212ENST00000543123 OTUD4Q01804 1114 aaKnown RBP12.85□□□□□ -0.35
RTN3-212ENST00000543123 RPE65Q16518 533 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
RTN3-212ENST00000543123 FNBP1LQ5T0N5 605 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 METRNLQ641Q3 311 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 TIPARPQ7Z3E1 657 aaKnown RBP12.85□□□□□ -0.35
RTN3-212ENST00000543123 BPHLQ86WA6 291 aaPredicted RBP12.85□□□□□ -0.35
RTN3-212ENST00000543123 KMT5CQ86Y97 462 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 TMTC1Q8IUR5 882 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 UNC5BQ8IZJ1 945 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 CARFQ8N187 725 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 TXLNBQ8N3L3 684 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 SIDT2Q8NBJ9 832 aaKnown RBP12.85□□□□□ -0.35
RTN3-212ENST00000543123 C9orf43Q8TAL5 461 aaPredicted RBP12.85□□□□□ -0.35
RTN3-212ENST00000543123 ACTL9Q8TC94 416 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 HEXDCQ8WVB3 486 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 ULK4Q96C45 1275 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 OSBPL8Q9BZF1 889 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 UGT1A7Q9HAW7 530 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 UGT1A10Q9HAW8 530 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 UGT1A8Q9HAW9 530 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 IMP3Q9NV31 184 aaKnown RBP12.85□□□□□ -0.35
RTN3-212ENST00000543123 LNPEPQ9UIQ6 1025 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 WDR37Q9Y2I8 494 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 KCTD3Q9Y597 815 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 ARL5AQ9Y689 179 aa12.85□□□□□ -0.35
RTN3-212ENST00000543123 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
RTN3-212ENST00000543123 UBR5O95071 2799 aaPredicted RBP12.85□□□□□ -0.35
RTN3-212ENST00000543123 GOLGA6L9A6NEM1 432 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 MGAT4DA6NG13 374 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 TLCD2A6NGC4 264 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 BTNL10A8MVZ5 291 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 NKX2-8O15522 239 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 KCNN4O15554 427 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 BUD23O43709 281 aaKnown RBP12.84□□□□□ -0.35
RTN3-212ENST00000543123 SRP72O76094 671 aaKnown RBP12.84□□□□□ -0.35
RTN3-212ENST00000543123 KIAA0754O94854 1291 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 AGTP01019 485 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 RBP3P10745 1247 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 MTHFD1P11586 935 aaKnown RBP12.84□□□□□ -0.35
RTN3-212ENST00000543123 ITGALP20701 1170 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 NDUFS1P28331 727 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 PBLDP30039 288 aaPredicted RBP12.84□□□□□ -0.35
RTN3-212ENST00000543123 DLSTP36957 453 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 HADHAP40939 763 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 SH3BP2P78314 561 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 ACY1Q03154 408 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 TUBB3Q13509 450 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 NFE2L1Q14494 772 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 BCL7AQ4VC05 210 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 DNTTIP2Q5QJE6 756 aaKnown RBP12.84□□□□□ -0.35
RTN3-212ENST00000543123 ANKRD20A2Q5SQ80 823 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 ANKRD20A1Q5TYW2 823 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 ANKRD20A3Q5VUR7 823 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 ARMC6Q6NXE6 501 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 DARS2Q6PI48 645 aaKnown RBP12.84□□□□□ -0.35
RTN3-212ENST00000543123 RANBP10Q6VN20 620 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 OOSP2Q86WS3 158 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 OR4K2Q8NGD2 314 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 OR2L2Q8NH16 312 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 SEC14L1Q92503 715 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 MRFAP1L1Q96HT8 127 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 FCRL4Q96PJ5 515 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 ASB8Q9H765 288 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 VPS37BQ9H9H4 285 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 IL17BQ9UHF5 180 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 CRLS1Q9UJA2 301 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 RARRES3Q9UL19 164 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 PSMD13Q9UNM6 376 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 HEBP2Q9Y5Z4 205 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 COLEC10Q9Y6Z7 277 aa12.84□□□□□ -0.35
RTN3-212ENST00000543123 UBA6A0AVT1 1052 aaPredicted RBP12.83□□□□□ -0.36
RTN3-212ENST00000543123 GAPDHSO14556 408 aaPredicted RBP12.83□□□□□ -0.36
RTN3-212ENST00000543123 TERTO14746 1132 aaKnown RBP12.83□□□□□ -0.36
RTN3-212ENST00000543123 GPR39O43194 453 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 KIF1CO43896 1103 aaKnown RBP12.83□□□□□ -0.36
RTN3-212ENST00000543123 SPAG6O75602 509 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 PSMB4P28070 264 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 ADRA1AP35348 466 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 KRT33BQ14525 404 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 DEFB109BQ30KR1 87 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 C16orf46Q6P387 395 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 ZNF449Q6P9G9 518 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 FAM83HQ6ZRV2 1179 aaPredicted RBP12.83□□□□□ -0.36
RTN3-212ENST00000543123 DET1Q7L5Y6 550 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 UBL4BQ8N7F7 174 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 TTC13Q8NBP0 860 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 GALNT6Q8NCL4 622 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 GPR150Q8NGU9 434 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 ELMO2Q96JJ3 720 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 LINC00615Q96LM1 132 aaPredicted RBP12.83□□□□□ -0.36
RTN3-212ENST00000543123 C12orf66Q96MD2 445 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 SPATA13Q96N96 652 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 CCM2Q9BSQ5 444 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms