RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PRRT3Q5FWE3 981 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 GAREM1Q9H706 876 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 SARS2Q9NP81 518 aaKnown RBP22.71■■□□□ 1.23
HOMER3-205ENST00000542541 TM7SF3Q9NS93 570 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 KLC4Q9NSK0 619 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 SLC23A2Q9UGH3 650 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 SMIM23A6NLE4 172 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 PROB1E7EW31 1015 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 LIN7AO14910 233 aaPredicted RBP22.7■■□□□ 1.22
HOMER3-205ENST00000542541 FDXRP22570 491 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 CCR7P32248 378 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 CLCNKAP51800 687 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 ATXN3P54252 364 aaPredicted RBP22.7■■□□□ 1.22
HOMER3-205ENST00000542541 DNAJC3Q13217 504 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 TTLL9Q3SXZ7 439 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 CFAP206Q8IYR0 622 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 DCLK2Q8N568 766 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 GPBAR1Q8TDU6 330 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 EPS8L3Q8TE67 593 aaKnown RBP22.7■■□□□ 1.22
HOMER3-205ENST00000542541 ZIM3Q96PE6 472 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 GPR21Q99679 349 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 TCEAL2Q9H3H9 227 aaPredicted RBP22.7■■□□□ 1.22
HOMER3-205ENST00000542541 TRMT6Q9UJA5 497 aaKnown RBP22.7■■□□□ 1.22
HOMER3-205ENST00000542541 DHRS7Q9Y394 339 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 FRYLO94915 3013 aa22.7■■□□□ 1.22
HOMER3-205ENST00000542541 CACNA1EQ15878 2313 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 KNL1Q8NG31 2342 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 SCAMP1O15126 338 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 STMN1P16949 149 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 AOAHP28039 575 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 CLCN7P51798 805 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 CDKN2DP55273 166 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 PDAP1Q13442 181 aaKnown RBP22.69■■□□□ 1.22
HOMER3-205ENST00000542541 BOP1Q14137 746 aaKnown RBP22.69■■□□□ 1.22
HOMER3-205ENST00000542541 SYTL3Q4VX76 610 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 ZBTB2Q8N680 514 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 INPP5DQ92835 1189 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 TMEM159Q96B96 161 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 FAM136AQ96C01 138 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 RUFY1Q96T51 708 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 LRRC61Q9BV99 259 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 SMOC1Q9H4F8 434 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 POPDC3Q9HBV1 291 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 FSCN3Q9NQT6 498 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 DNAJC16Q9Y2G8 782 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 MED16Q9Y2X0 877 aa22.69■■□□□ 1.22
HOMER3-205ENST00000542541 A0A1B0GTQ1 180 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 ENGP17813 658 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 IDSP22304 550 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 TAS2R39P59534 338 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 ZNF844Q08AG5 666 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 RPA4Q13156 261 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 BMPR2Q13873 1038 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 PLEKHS1Q5SXH7 462 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 TAF8Q7Z7C8 310 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 ACVR1CQ8NER5 493 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 LKAAEAR1Q8TD35 194 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 LMX1AQ8TE12 382 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 OSGEPL1Q9H4B0 414 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 FAM8A1Q9UBU6 413 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 TBK1Q9UHD2 729 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 ACSL5Q9ULC5 683 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 KCNK6Q9Y257 313 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 GPR179Q6PRD1 2367 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 PI4KAP42356 2102 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 HMX2A2RU54 273 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 NEMP2A6NFY4 417 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 TRIM49D1C9J1S8 452 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 AQP9O43315 295 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 PIAS2O75928 621 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 CRABP2P29373 138 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 ACTR1BP42025 376 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 RAB10P61026 200 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 ACTR1AP61163 376 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 HSPA14Q0VDF9 509 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 NFE2L1Q14494 772 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 KRT71Q3SY84 523 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 CEP85LQ5SZL2 805 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 METRNLQ641Q3 311 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 GKN2Q86XP6 184 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 SIDT2Q8NBJ9 832 aaKnown RBP22.68■■□□□ 1.22
HOMER3-205ENST00000542541 OLFM1Q99784 485 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 GTPBP2Q9BX10 602 aaKnown RBP22.68■■□□□ 1.22
HOMER3-205ENST00000542541 VIPAS39Q9H9C1 493 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 COG4Q9H9E3 785 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 SYTL2Q9HCH5 934 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 GULP1Q9UBP9 304 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 DOLKQ9UPQ8 538 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 PLEKHM1Q9Y4G2 1056 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 CSNK1G3Q9Y6M4 447 aa22.68■■□□□ 1.22
HOMER3-205ENST00000542541 FOXD2O60548 495 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-205ENST00000542541 TYK2P29597 1187 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 SERPINB8P50452 374 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 TIAL1Q01085 375 aaKnown RBP eCLIP22.67■■□□□ 1.22
HOMER3-205ENST00000542541 SPEM2Q0P670 501 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 C1orf61Q13536 156 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 CSRP2Q16527 193 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 ZNF658BQ4V348 819 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-205ENST00000542541 TCEAL6Q6IPX3 200 aa22.67■■□□□ 1.22
HOMER3-205ENST00000542541 CCDC91Q7Z6B0 441 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms