RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 THBS3P49746 956 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 NPY4RP50391 375 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 SUOXP51687 545 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 ZNF75DP51815 510 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 YWHAHQ04917 246 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 FAM27E3Q08E93 113 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 SREBF2Q12772 1141 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 E2F5Q15329 346 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 DLG2Q15700 870 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 CBWD6Q4V339 395 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 SOWAHCQ53LP3 525 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 CBWD3Q5JTY5 395 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 TMEM198Q66K66 360 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 PQLC2Q6ZP29 291 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 DPPA4Q7L190 304 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 SPATA21Q7Z572 469 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 PELI3Q8N2H9 469 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 FBXO39Q8N4B4 442 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 C10orf53Q8N6V4 93 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 XXYLT1Q8NBI6 393 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 AGBL3Q8NEM8 1001 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 CTCFLQ8NI51 663 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 SLC35F5Q8WV83 523 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 IGSF8Q969P0 613 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 TMEM18Q96B42 140 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 HES6Q96HZ4 224 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 SMC6Q96SB8 1091 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 DDOQ99489 341 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 MGME1Q9BQP7 344 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 KRTAP1-5Q9BYS1 174 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 NPFFR1Q9GZQ6 430 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 MMADHCQ9H3L0 296 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 PIGMQ9H3S5 423 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 GOLPH3LQ9H4A5 285 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 RETREG1Q9H6L5 497 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 TASP1Q9H6P5 420 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 MBNL1Q9NR56 388 aaKnown RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 PAG1Q9NWQ8 432 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 GDE1Q9NZC3 331 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 UBA2Q9UBT2 640 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 STK39Q9UEW8 545 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 IL17BQ9UHF5 180 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 SLC24A2Q9UI40 661 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 PCDHGA5Q9Y5G8 931 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 USP32Q8NFA0 1604 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 COL14A1Q05707 1796 aaKnown RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 E9PCH4 1651 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 PLCH1Q4KWH8 1693 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 PXDNQ92626 1479 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 NUP155O75694 1391 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 GPRASP1Q5JY77 1395 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 A0A0U1RQK1 487 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 ZNF320A2RRD8 509 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 A6NNC1 897 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 MAP2K7O14733 419 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 SLC7A4O43246 635 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 KLK8O60259 260 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 SYNCRIPO60506 623 aaKnown RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 PRAMEF11O60813 436 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 CHRNB1P11230 501 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 PFKFB1P16118 471 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 STMN1P16949 149 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 DNASE1P24855 282 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 CDC25AP30304 524 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 KRT2P35908 639 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 CDKN2AP42771 156 aaKnown RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 HTR6P50406 440 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 P2RX3P56373 397 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 NANOS2P60321 138 aaKnown RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 SIRPAP78324 504 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 PPP2R2BQ00005 443 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 PPATQ06203 517 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 CXCL9Q07325 125 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 MAD2L1Q13257 205 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 SLMAPQ14BN4 828 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 HYAL4Q2M3T9 481 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 ZNF674Q2M3X9 581 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 GLIPR1L2Q4G1C9 344 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 SGO1Q5FBB7 561 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 RUSC1-AS1Q66K80 236 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 TMEM211Q6ICI0 200 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 IYDQ6PHW0 289 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 TRAT1Q6PIZ9 186 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 PPP1R21Q6ZMI0 780 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 RBPMS2Q6ZRY4 209 aaKnown RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 MSANTD1Q6ZTZ1 278 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 TRILQ7L0X0 811 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 GET4Q7L5D6 327 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 CENPVQ7Z7K6 275 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 PATL1Q86TB9 770 aaKnown RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 KLHL7Q8IXQ5 586 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 SIX6OS1Q8N1H7 587 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 PI4KAP1Q8N8J0 262 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 RBM15BQ8NDT2 890 aaKnown RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 GRK7Q8WTQ7 553 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 KCNE4Q8WWG9 221 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 ZNF558Q96NG5 402 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 CAMK1GQ96NX5 476 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 EGFL8Q99944 293 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms