RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 P2RY12Q9H244 342 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 CCDC68Q9H2F9 335 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 UCK1Q9HA47 277 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 SAYSD1Q9NPB0 183 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 ZDHHC18Q9NUE0 388 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 SIRPGQ9P1W8 387 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 DMGDHQ9UI17 866 aaKnown RBP18.43■□□□□ 0.54
VPS33A-205ENST00000541169 FBXO5Q9UKT4 447 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 CORO1CQ9ULV4 474 aaPredicted RBP18.43■□□□□ 0.54
VPS33A-205ENST00000541169 DNAJC16Q9Y2G8 782 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 PLEKHM1Q9Y4G2 1056 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 PCYT1BQ9Y5K3 369 aaPredicted RBP18.43■□□□□ 0.54
VPS33A-205ENST00000541169 HEBP2Q9Y5Z4 205 aa18.43■□□□□ 0.54
VPS33A-205ENST00000541169 BPTFQ12830 3046 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 DMXL1Q9Y485 3027 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 LY6G6EA0A0G2JKS1 128 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 RHPN2P1A8MT19 583 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 OR1I1O60431 355 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 SNX2O60749 519 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 S1PR4O95977 384 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 APOA4P06727 396 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 SLC35G4P0C7Q5 338 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 FTH1P19P0C7X4 201 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 PRSS56P0CW18 603 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 NDUFS1P28331 727 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 TMED2Q15363 201 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 TCEA2Q15560 299 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 HSP90AA5PQ58FG0 334 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 ZNF438Q7Z4V0 828 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 IGDCC3Q8IVU1 814 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 CACTIN-AS1Q8N1I8 211 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 ARL14Q8N4G2 192 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 IFI44Q8TCB0 444 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.42■□□□□ 0.54
VPS33A-205ENST00000541169 CDKL2Q92772 493 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 CFAP36Q96G28 342 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 FMO2Q99518 471 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 ABCG4Q9H172 646 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 EPB41L1Q9H4G0 881 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 PPANQ9NQ55 473 aaKnown RBP18.42■□□□□ 0.54
VPS33A-205ENST00000541169 POT1Q9NUX5 634 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 MOCS1Q9NZB8 636 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 KLHL42Q9P2K6 505 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 LRIT1Q9P2V4 623 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 U3KQA8 63 aa18.42■□□□□ 0.54
VPS33A-205ENST00000541169 ARHGEF17Q96PE2 2063 aaPredicted RBP18.42■□□□□ 0.54
VPS33A-205ENST00000541169 SPAARA0A1B0GVQ0 90 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 UBA6A0AVT1 1052 aaPredicted RBP18.41■□□□□ 0.54
VPS33A-205ENST00000541169 ESYT3A0FGR9 886 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 CPED1A4D0V7 1026 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 MAGEA4P43358 317 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 LEPRP48357 1165 aaKnown RBP18.41■□□□□ 0.54
VPS33A-205ENST00000541169 MGAT5Q09328 741 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 NR1D2Q14995 579 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 SLC26A11Q86WA9 606 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 ANKMY2Q8IV38 441 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 TRIM48Q8IWZ4 208 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 CFAP206Q8IYR0 622 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 GALNT15Q8N3T1 639 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 C2CD4AQ8NCU7 369 aaPredicted RBP18.41■□□□□ 0.54
VPS33A-205ENST00000541169 ADAMTS14Q8WXS8 1223 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 IFT81Q8WYA0 676 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 TMEM159Q96B96 161 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 PWWP2AQ96N64 755 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 DPYSL5Q9BPU6 564 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 TRIM56Q9BRZ2 755 aaKnown RBP18.41■□□□□ 0.54
VPS33A-205ENST00000541169 PRDM8Q9NQV8 689 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 ZFATQ9P243 1243 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 COLEC10Q9Y6Z7 277 aa18.41■□□□□ 0.54
VPS33A-205ENST00000541169 PIKFYVEQ9Y2I7 2098 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 GOLGA8KD6RF30 607 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 GOLGA8TH3BQL2 631 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 IFRD1O00458 451 aaPredicted RBP18.4■□□□□ 0.54
VPS33A-205ENST00000541169 BANF1O75531 89 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 TCEA3O75764 348 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 PBLDP30039 288 aaPredicted RBP18.4■□□□□ 0.54
VPS33A-205ENST00000541169 EPHA4P54764 986 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 EIF3BP55884 814 aaKnown RBP18.4■□□□□ 0.54
VPS33A-205ENST00000541169 HHEXQ03014 270 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 NFE2L1Q14494 772 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 SLMAPQ14BN4 828 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 SYTL3Q4VX76 610 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 HP1BP3Q5SSJ5 553 aaPredicted RBP18.4■□□□□ 0.54
VPS33A-205ENST00000541169 UGT3A1Q6NUS8 523 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 C3orf62Q6ZUJ4 267 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 EFL1Q7Z2Z2 1120 aaKnown RBP18.4■□□□□ 0.54
VPS33A-205ENST00000541169 CCDC25Q86WR0 208 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 ELMO1Q92556 727 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 GRAMD1AQ96CP6 724 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 CXorf40BQ96DE9 158 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 BIRC8Q96P09 236 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 COG4Q9H9E3 785 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 LATS2Q9NRM7 1088 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 IARS2Q9NSE4 1012 aaKnown RBP18.4■□□□□ 0.54
VPS33A-205ENST00000541169 TOR4AQ9NXH8 423 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 CPNE7Q9UBL6 633 aa18.4■□□□□ 0.54
VPS33A-205ENST00000541169 GIPC1O14908 333 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 KDM1AO60341 852 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 VIPP01282 170 aa18.39■□□□□ 0.53
VPS33A-205ENST00000541169 ERVK-10P10266 1014 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms