RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 PMS2P54278 862 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 EIF3BP55884 814 aaKnown RBP17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 CTBP1Q13363 440 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 KYNUQ16719 465 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 SYTL3Q4VX76 610 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 PLEKHS1Q5SXH7 462 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 OGFOD3Q6PK18 319 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 ABRAXAS1Q6UWZ7 409 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 KDM7AQ6ZMT4 941 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 DET1Q7L5Y6 550 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 TAOK1Q7L7X3 1001 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 OTOAQ7RTW8 1153 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 C11orf96Q7Z7L8 435 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 NAXDQ8IW45 347 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 ARL10Q8N8L6 244 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 LRRN4CLQ8ND94 238 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 ZFPM2Q8WW38 1151 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 NAT6Q93015 286 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 VPS39Q96JC1 886 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 WDR83Q9BRX9 315 aaKnown RBP17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 BOCQ9BWV1 1114 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 CDC42EP4Q9H3Q1 356 aaKnown RBP17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 TAS2R13Q9NYV9 303 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 PLXNB3Q9ULL4 1909 aa17.21■□□□□ 0.35
CLSTN3-210ENST00000540931 CABIN1Q9Y6J0 2220 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 LRP4O75096 1905 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 ADAMTS9Q9P2N4 1935 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 GOLGA8KD6RF30 607 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 GOLGA8TH3BQL2 631 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 IFRD1O00458 451 aaPredicted RBP17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 SDC3O75056 442 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 VPS26AO75436 327 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 ERLIN1O75477 346 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 LDOC1O95751 146 aaPredicted RBP17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 CD59P13987 128 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 CHRM3P20309 590 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 ATP5DP30049 168 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 SPRP35270 261 aaPredicted RBP17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 ILKQ13418 452 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 BIRC2Q13490 618 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 C1orf61Q13536 156 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 SEMA3AQ14563 771 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 ZNF648Q5T619 568 aaPredicted RBP17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 GRTP1Q5TC63 336 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 LGSNQ5TDP6 509 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 FAM45BPQ6NSW5 357 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 SLC30A9Q6PML9 568 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 CCDC91Q7Z6B0 441 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 SLC9B2Q86UD5 537 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 CLDN19Q8N6F1 224 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 WDR48Q8TAF3 677 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 FAM45AQ8TCE6 357 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 ZDHHC1Q8WTX9 485 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 TRIM56Q9BRZ2 755 aaKnown RBP17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 TCEAL2Q9H3H9 227 aaPredicted RBP17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 OSGEPL1Q9H4B0 414 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 ACSS3Q9H6R3 686 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 NINJ2Q9NZG7 142 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 FTSJ1Q9UET6 329 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 FETUBQ9UGM5 382 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 PNMA8BQ9ULN7 279 aaPredicted RBP17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 TMEM131Q92545 1883 aa17.2■□□□□ 0.34
CLSTN3-210ENST00000540931 TNFSF14O43557 240 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 OR1I1O60431 355 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 RPN2P04844 631 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 SLC35G4P0C7Q5 338 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 CBSLP0DN79 551 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 CEACAM1P13688 526 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 PNLIPP16233 465 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 CNTFP26441 200 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 FMO4P31512 558 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 CBSP35520 551 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 GP5P40197 560 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 GPX6P59796 221 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 IL9RQ01113 521 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 NR0B2Q15466 257 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 ERCC6LQ2NKX8 1250 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 TRMT10BQ6PF06 316 aaKnown RBP17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 STRA8Q7Z7C7 330 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 GLRX5Q86SX6 157 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 NRROSQ86YC3 692 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 GATAD2AQ86YP4 633 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 DENND6AQ8IWF6 608 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 CTAGE3PQ8IX95 158 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 CFAP206Q8IYR0 622 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 EID2Q8N6I1 236 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 MAPK15Q8TD08 544 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 FBF1Q8TES7 1133 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 ELMO1Q92556 727 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 TSPAN17Q96FV3 270 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 BIRC8Q96P09 236 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 RHOJQ9H4E5 214 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 RXFP3Q9NSD7 469 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 UCKL1Q9NWZ5 548 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 RAB21Q9UL25 225 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 CRYL1Q9Y2S2 319 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 COLEC10Q9Y6Z7 277 aa17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 COL5A1P20908 1838 aaPredicted RBP17.19■□□□□ 0.34
CLSTN3-210ENST00000540931 PRR19A6NJB7 356 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms