RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TCP10LQ8TDR4 215 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 SCARF2Q96GP6 870 aaPredicted RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 ATXN7L3BQ96GX2 97 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 GTPBP2Q9BX10 602 aaKnown RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 LGR4Q9BXB1 951 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 GAREM1Q9H706 876 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 IL21RQ9HBE5 538 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 BPIFA1Q9NP55 256 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 IL26Q9NPH9 171 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 PHPT1Q9NRX4 125 aaPredicted RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 PCMTD2Q9NV79 361 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 INTS10Q9NVR2 710 aaKnown RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 SMOXQ9NWM0 555 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 NKIRAS1Q9NYS0 192 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 SLC17A7Q9P2U7 560 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 PNMA8BQ9ULN7 279 aaPredicted RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 CORO1CQ9ULV4 474 aaPredicted RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 FNDC3AQ9Y2H6 1198 aaKnown RBP10.46□□□□□ -0.73
ATL3-204ENST00000540699 PKP3Q9Y446 797 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 OR1A2Q9Y585 309 aa10.46□□□□□ -0.73
ATL3-204ENST00000540699 TRBV5-4A0A0C4DH59 114 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 FAM95CA0A1B0GW59 222 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 TMEM202A6NGA9 273 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 AGAP14A8MT82 685 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 CACNB4O00305 520 aaPredicted RBP10.45□□□□□ -0.74
ATL3-204ENST00000540699 COPEO14579 308 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 WISP3O95389 354 aaPredicted RBP10.45□□□□□ -0.74
ATL3-204ENST00000540699 CSF2P04141 144 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 MPOP05164 745 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 KELP23276 732 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 HTR1BP28222 390 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 SPAM1P38567 509 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 GPR1P46091 355 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 ARRB1P49407 418 aaPredicted RBP10.45□□□□□ -0.74
ATL3-204ENST00000540699 CCT8P50990 548 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 ATXN3P54252 364 aaPredicted RBP10.45□□□□□ -0.74
ATL3-204ENST00000540699 POU4F1Q01851 419 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 FASTKD1Q53R41 847 aaKnown RBP10.45□□□□□ -0.74
ATL3-204ENST00000540699 RBM20Q5T481 1227 aaKnown RBP10.45□□□□□ -0.74
ATL3-204ENST00000540699 ZNF549Q6P9A3 640 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 LDB1Q86U70 411 aaPredicted RBP10.45□□□□□ -0.74
ATL3-204ENST00000540699 PIANPQ8IYJ0 282 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 MGARPQ8TDB4 240 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 SAP25Q8TEE9 199 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 CKAP2Q8WWK9 683 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 LPGAT1Q92604 370 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 HIC2Q96JB3 615 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 CABS1Q96KC9 395 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 WDR92Q96MX6 357 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 VPS35Q96QK1 796 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 TCF12Q99081 682 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 CAB39LQ9H9S4 337 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 KLF15Q9UIH9 416 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 TMPRSS11EQ9UL52 423 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 SLC39A10Q9ULF5 831 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 GRID1Q9ULK0 1009 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 SLC17A4Q9Y2C5 497 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 PLLPQ9Y342 182 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 DGKBQ9Y6T7 804 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 ZFYVE26Q68DK2 2539 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 LAMA5O15230 3695 aa10.45□□□□□ -0.74
ATL3-204ENST00000540699 NBEAQ8NFP9 2946 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 GLYATL1P3A0A0U1RQE8 302 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 GLRA3O75311 464 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 TOP3BO95985 862 aaKnown RBP10.44□□□□□ -0.74
ATL3-204ENST00000540699 C2P06681 752 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 CEACAM5P06731 702 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 GSTA1P08263 222 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 SLC35E2BP0CK96 405 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 CD59P13987 128 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 EPHA8P29322 1005 aaPredicted RBP10.44□□□□□ -0.74
ATL3-204ENST00000540699 TYK2P29597 1187 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 CA5AP35218 305 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 CDKN1CP49918 316 aaPredicted RBP10.44□□□□□ -0.74
ATL3-204ENST00000540699 TAS2R39P59534 338 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 TIAL1Q01085 375 aaKnown RBP eCLIP10.44□□□□□ -0.74
ATL3-204ENST00000540699 CACNG1Q06432 222 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 USP10Q14694 798 aaKnown RBP10.44□□□□□ -0.74
ATL3-204ENST00000540699 INSCQ1MX18 579 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 ALG11Q2TAA5 492 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 LVRNQ6Q4G3 990 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 SDCCAG8Q86SQ7 713 aaPredicted RBP10.44□□□□□ -0.74
ATL3-204ENST00000540699 CEP97Q8IW35 865 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 OTUD6BQ8N6M0 293 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 KDF1Q8NAX2 398 aaPredicted RBP10.44□□□□□ -0.74
ATL3-204ENST00000540699 OR56A4Q8NGH8 313 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 BTN2A2Q8WVV5 523 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 GLYATL1Q969I3 302 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 ELMO2Q96JJ3 720 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 OLFM1Q99784 485 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 AARSD1Q9BTE6 412 aaKnown RBP10.44□□□□□ -0.74
ATL3-204ENST00000540699 SPATA16Q9BXB7 569 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 C12orf65Q9H3J6 166 aaKnown RBP10.44□□□□□ -0.74
ATL3-204ENST00000540699 FGF22Q9HCT0 170 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 MLXIPLQ9NP71 852 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 TM7SF3Q9NS93 570 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 APPL1Q9UKG1 709 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 EMCNQ9ULC0 261 aa10.44□□□□□ -0.74
ATL3-204ENST00000540699 WASF3Q9UPY6 502 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms