RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 MITFO75030 526 aaPredicted RBP12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 MED26O95402 600 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 GOT2P00505 430 aaKnown RBP12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 F9P00740 461 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 CCDC159P0C7I6 412 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 SLC2A3P11169 496 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 CD1DP15813 335 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 BMPR1AP36894 532 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 SLC26A2P50443 739 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 CXCL9Q07325 125 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 CBX2Q14781 532 aaPredicted RBP12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 FAM187BQ17R55 369 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 PLA2G4EQ3MJ16 856 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 TXNDC11Q6PKC3 985 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 CLEC20AQ6ZU45 233 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 PHYKPLQ8IUZ5 450 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 BLOC1S5Q8TDH9 187 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 TSPEARQ8WU66 669 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 ZBTB18Q99592 522 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 NXF3Q9H4D5 531 aaKnown RBP12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 UTS2RQ9UKP6 389 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 FAM92AA1XBS5 289 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 TBKBP1A7MCY6 615 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 CENPXA8MT69 81 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 CCRL2O00421 344 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 AIREO43918 545 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 KCNK2O95069 426 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 SPNP16150 400 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 ZNF37AP17032 561 aaPredicted RBP12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 CCNCP24863 283 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 HCAR3P49019 387 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 ISL1P61371 349 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 ASCC1Q8N9N2 400 aaKnown RBP12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 SH3RF2Q8TEC5 729 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 TRIB2Q92519 343 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 YME1L1Q96TA2 773 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 PIM2Q9P1W9 311 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 GLP2RO95838 553 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 ITGB6P18564 788 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 PCMT1P22061 227 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 PRDX3P30048 256 aaKnown RBP12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 CD86P42081 329 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 GPR162Q16538 588 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 DCAF4L1Q3SXM0 396 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 EFL1Q7Z2Z2 1120 aaKnown RBP12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 AMER2Q8N7J2 671 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 NUDT8Q8WV74 236 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 NT5C3BQ969T7 300 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 MRGPRX2Q96LB1 330 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 SLC2A13Q96QE2 648 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 TMEM209Q96SK2 561 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 NUAK2Q9H093 628 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 ZBTB20Q9HC78 741 aaPredicted RBP12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 PRDM8Q9NQV8 689 aa12.68□□□□□ -0.38
SFSWAP-209ENST00000540469 CD4P01730 458 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 ZNF286BP0CG31 522 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 DAOAP59103 153 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 ERVK-8P63133 956 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 KRR1Q13601 381 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 ZNF181Q2M3W8 571 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 TPRG1LQ5T0D9 272 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 ZNF691Q5VV52 312 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 GCNT7Q6ZNI0 430 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 LINC00299Q6ZSB3 139 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 OR8H2Q8N162 312 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 STAG3L4Q8TBR4 150 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 TBATAQ96M53 351 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 TRPV5Q9NQA5 729 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 KCTD3Q9Y597 815 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 FAM172BPA6NC97 362 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 TNFRSF10AO00220 468 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 ENPP3O14638 875 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 RECQL5O94762 991 aaPredicted RBP12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 LCKP06239 509 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 POLR2EP19388 210 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 ARSDP51689 593 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 OR2B6P58173 313 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 DAB2P98082 770 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 CDC20Q12834 499 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 SEMA3BQ13214 749 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 SV2CQ496J9 727 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 DALRD3Q5D0E6 543 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 ZNF484Q5JVG2 852 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 CELF2-AS1Q8N7Q2 184 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 OR5K1Q8NHB7 308 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 BCL7BQ9BQE9 202 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 SLC39A8Q9C0K1 460 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 OR2B2Q9GZK3 357 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 TANC1Q9C0D5 1861 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 ZNF682O95780 498 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 CHRNB1P11230 501 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 GGT1P19440 569 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 PPP2R2BQ00005 443 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 TSNQ15631 228 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 SMN1Q16637 294 aaKnown RBP12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 SPANXN2Q5MJ10 180 aa12.67□□□□□ -0.38
SFSWAP-209ENST00000540469 WSCD1Q658N2 575 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms