RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 THSD1Q9NS62 852 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 POT1Q9NUX5 634 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 NEU2Q9Y3R4 380 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 NBEAQ8NFP9 2946 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 ITPR1Q14643 2758 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 ZW10O43264 779 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 TMEM63AO94886 807 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 GAS8O95995 478 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 ITGA2BP08514 1039 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 RALBP11234 206 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 TYRP1P17643 537 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 TPSB2P20231 275 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 EPHA4P54764 986 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 GFERP55789 205 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 PCBP4P57723 403 aaKnown RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 GPS1Q13098 491 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 GPR18Q14330 331 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 SEMA3AQ14563 771 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 TPSAB1Q15661 275 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 CLPPQ16740 277 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 ZNF658BQ4V348 819 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 SNAP47Q5SQN1 464 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 C4orf22Q6V702 233 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 CLEC14AQ86T13 490 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 RSC1A1Q92681 617 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 PMEPA1Q969W9 287 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 CXorf40BQ96DE9 158 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 INSM2Q96T92 566 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-212ENST00000540230 WWP1Q9H0M0 922 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 RIMKLBQ9ULI2 386 aa14.76□□□□□ -0.05
UBE3B-212ENST00000540230 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.75□□□□□ -0.05
UBE3B-212ENST00000540230 A8MU76 341 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 CFAP99D6REC4 459 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 PHF2O75151 1096 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 POLBP06746 335 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 JMJD7P0C870 316 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 MGAT1P26572 445 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 HALP42357 657 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 CFAP206Q8IYR0 622 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 PPHLN1Q8NEY8 458 aaKnown RBP14.75□□□□□ -0.05
UBE3B-212ENST00000540230 CPT1BQ92523 772 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 RMDN2Q96LZ7 410 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 CMKLR1Q99788 373 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 UCK1Q9HA47 277 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 IMP3Q9NV31 184 aaKnown RBP14.75□□□□□ -0.05
UBE3B-212ENST00000540230 SYBUQ9NX95 663 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 PDP2Q9P2J9 529 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 KLHL3Q9UH77 587 aa14.75□□□□□ -0.05
UBE3B-212ENST00000540230 CES2O00748 559 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 OR1I1O60431 355 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 AVILO75366 819 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 UBXN7O94888 489 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 FGF3P11487 239 aaPredicted RBP14.74□□□□□ -0.05
UBE3B-212ENST00000540230 NMBRP28336 390 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 SLC5A2P31639 672 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 MAGEA6P43360 314 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 MAPK10P53779 464 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 GNG11P61952 73 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 GSE1Q14687 1217 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 PCID2Q5JVF3 399 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 WDR74Q6RFH5 385 aaPredicted RBP14.74□□□□□ -0.05
UBE3B-212ENST00000540230 AFTPHQ6ULP2 937 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 CES3Q6UWW8 571 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 LDB1Q86U70 411 aaPredicted RBP14.74□□□□□ -0.05
UBE3B-212ENST00000540230 JAMLQ86YT9 394 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 SPACA3Q8IXA5 215 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 MPP5Q8N3R9 675 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 AVL9Q8NBF6 648 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 ZNF248Q8NDW4 579 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 HM13Q8TCT9 377 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 HEXDCQ8WVB3 486 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 C12orf66Q96MD2 445 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 NAP1L3Q99457 506 aaPredicted RBP14.74□□□□□ -0.05
UBE3B-212ENST00000540230 TRIM56Q9BRZ2 755 aaKnown RBP14.74□□□□□ -0.05
UBE3B-212ENST00000540230 COG4Q9H9E3 785 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 TREX1Q9NSU2 369 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 OCIAD1Q9NX40 245 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 FOXJ2Q9P0K8 574 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 MARCH4Q9P2E8 410 aaPredicted RBP14.74□□□□□ -0.05
UBE3B-212ENST00000540230 PTPRQQ9UMZ3 2332 aa14.74□□□□□ -0.05
UBE3B-212ENST00000540230 CHD6Q8TD26 2715 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 AHCTF1Q8WYP5 2266 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 C9orf172C9J069 976 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 HGSO14964 777 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-212ENST00000540230 PRAMEF10O60809 474 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 MTHFD1P11586 935 aaKnown RBP14.73□□□□□ -0.05
UBE3B-212ENST00000540230 ARNTP27540 789 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 PDHA2P29803 388 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 PPP1CAP62136 330 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 TRA2AQ13595 282 aaKnown RBP eCLIP14.73□□□□□ -0.05
UBE3B-212ENST00000540230 ITIH4Q14624 930 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 CAPRIN2Q6IMN6 1127 aaKnown RBP14.73□□□□□ -0.05
UBE3B-212ENST00000540230 LRRC8BQ6P9F7 803 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 NAPRTQ6XQN6 538 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 ARHGAP22Q7Z5H3 698 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 CAND1Q86VP6 1230 aaKnown RBP14.73□□□□□ -0.05
UBE3B-212ENST00000540230 C17orf53Q8N3J3 647 aaPredicted RBP14.73□□□□□ -0.05
UBE3B-212ENST00000540230 OR6P1Q8NGX9 317 aa14.73□□□□□ -0.05
UBE3B-212ENST00000540230 OR4L1Q8NH43 312 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms