RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 SGO1Q5FBB7 561 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 SPOUT1Q5T280 376 aaKnown RBP11.36□□□□□ -0.59
C11orf54-214ENST00000540113 PTRHD1Q6GMV3 140 aaKnown RBP11.36□□□□□ -0.59
C11orf54-214ENST00000540113 SLC39A5Q6ZMH5 540 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 MBOAT1Q6ZNC8 495 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 SPATA19Q7Z5L4 167 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 SERPINA9Q86WD7 417 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 TRIML2Q8N7C3 387 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 KCNJ9Q92806 393 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 ALG14Q96F25 216 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 FBXL20Q96IG2 436 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 PHF12Q96QT6 1004 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 HERC2P3Q9BVR0 1158 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 P2RY12Q9H244 342 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 RC3H2Q9HBD1 1191 aaKnown RBP11.36□□□□□ -0.59
C11orf54-214ENST00000540113 IL21Q9HBE4 155 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 FARSBQ9NSD9 589 aaKnown RBP11.36□□□□□ -0.59
C11orf54-214ENST00000540113 ACTR3BQ9P1U1 418 aa11.36□□□□□ -0.59
C11orf54-214ENST00000540113 POLR3HQ9Y535 204 aaPredicted RBP11.36□□□□□ -0.59
C11orf54-214ENST00000540113 FZD6O60353 706 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 PRAMEF1O95521 474 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 IL10P22301 178 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 ERVK-8P63133 956 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 RAB33AQ14088 237 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 INPP5AQ14642 412 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 ATP6AP1LQ52LC2 224 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 RFTN2Q52LD8 501 aaPredicted RBP11.35□□□□□ -0.59
C11orf54-214ENST00000540113 LCN8Q6JVE9 175 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 OGFOD2Q6N063 350 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 PPP4R4Q6NUP7 873 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 PRMT9Q6P2P2 845 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 TXNDC11Q6PKC3 985 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 SBSNQ6UWP8 590 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 OFCC1Q8IZS5 231 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 TMEM199Q8N511 208 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 CYGBQ8WWM9 190 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 AGPAT4Q9NRZ5 378 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 DNMT3BQ9UBC3 853 aaKnown RBP11.35□□□□□ -0.59
C11orf54-214ENST00000540113 INSL5Q9Y5Q6 135 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 SCN8AQ9UQD0 1980 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 C1orf232A0A0U1RR37 186 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 GAPDHSO14556 408 aaPredicted RBP11.35□□□□□ -0.59
C11orf54-214ENST00000540113 PRRG1O14668 218 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 VPS4BO75351 444 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 EEDO75530 441 aaKnown RBP11.35□□□□□ -0.59
C11orf54-214ENST00000540113 H6PDO95479 791 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 HRH2P25021 359 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 PTGER3P43115 390 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 NUBP1P53384 320 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 DEFB103AP81534 67 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 CDH18Q13634 790 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 GTF2H2Q13888 395 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 VEPH1Q14D04 833 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 NR6A1Q15406 480 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 PHKG1Q16816 387 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 SLC44A4Q53GD3 710 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 GTF2H2CQ6P1K8 395 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 Q6ZNB5 142 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 TPGS1Q6ZTW0 290 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 FIBCD1Q8N539 461 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.35□□□□□ -0.59
C11orf54-214ENST00000540113 ZNF689Q96CS4 500 aaPredicted RBP11.35□□□□□ -0.59
C11orf54-214ENST00000540113 MTFMTQ96DP5 389 aaKnown RBP11.35□□□□□ -0.59
C11orf54-214ENST00000540113 ZNF558Q96NG5 402 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 C1QTNF3Q9BXJ4 246 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 ACTL8Q9H568 366 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 ASB8Q9H765 288 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 RPF2Q9H7B2 306 aaKnown RBP11.35□□□□□ -0.59
C11orf54-214ENST00000540113 IPPKQ9H8X2 491 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 VCX3AQ9NNX9 186 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 SUN2Q9UH99 717 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 SLC4A7Q9Y6M7 1214 aa11.35□□□□□ -0.59
C11orf54-214ENST00000540113 DENND4CQ5VZ89 1909 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 TCRBV5S2A0A599 114 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 AQP12BA6NM10 295 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 H3BNH8 94 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 NRG2O14511 850 aaPredicted RBP11.34□□□□□ -0.59
C11orf54-214ENST00000540113 EI24O14681 340 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 PRMT5O14744 637 aaPredicted RBP11.34□□□□□ -0.59
C11orf54-214ENST00000540113 TAPBPO15533 448 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 HNRNPRO43390 633 aaKnown RBP11.34□□□□□ -0.59
C11orf54-214ENST00000540113 SLC25A14O95258 325 aaPredicted RBP11.34□□□□□ -0.59
C11orf54-214ENST00000540113 ESR1P03372 595 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 FASP25445 335 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 CACNG1Q06432 222 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 BNIP2Q12982 314 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 CNKSR3Q6P9H4 555 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 ZNF783Q6ZMS7 281 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 TSPAN33Q86UF1 283 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 AQP12AQ8IXF9 295 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 TCEAL8Q8IYN2 117 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 ZNF786Q8N393 782 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 HJURPQ8NCD3 748 aaPredicted RBP11.34□□□□□ -0.59
C11orf54-214ENST00000540113 PIH1D2Q8WWB5 315 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 TFAP2CQ92754 450 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 RMND5BQ96G75 393 aaPredicted RBP11.34□□□□□ -0.59
C11orf54-214ENST00000540113 MYO19Q96H55 970 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 TMEM169Q96HH4 297 aa11.34□□□□□ -0.59
C11orf54-214ENST00000540113 NUSAP1Q9BXS6 441 aaKnown RBP11.34□□□□□ -0.59
C11orf54-214ENST00000540113 BRINP2Q9C0B6 783 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms