RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 SFRP1Q8N474 314 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 TMEM199Q8N511 208 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 OR4F6Q8NGB9 312 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 SLC22A17Q8WUG5 538 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 CLP1Q92989 425 aaKnown RBP11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 PBXIP1Q96AQ6 731 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 TRIM54Q9BYV2 358 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 CEP44Q9C0F1 390 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 Q9H521 79 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 RDH14Q9HBH5 336 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 HEBP1Q9NRV9 189 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 ELOVL2Q9NXB9 296 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 ZDHHC3Q9NYG2 299 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 GMPR2Q9P2T1 348 aaKnown RBP11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 PCDHA9Q9Y5H5 950 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 FAM234BA2RU67 622 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 AQP12BA6NM10 295 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 A8MX80 341 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 H0YJX3 145 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 GRM6O15303 877 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 CCL16O15467 120 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 POP4O95707 220 aaKnown RBP11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 CHRM1P11229 460 aaPredicted RBP11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 ZNF26P17031 533 aaPredicted RBP11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 PAX7P23759 505 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 NSG1P42857 185 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 HSPA13P48723 471 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 HTR6P50406 440 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 POLR2JP52435 117 aaKnown RBP11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 EPHA5P54756 1037 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 PTSQ03393 145 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 EMX2Q04743 252 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 BNIP2Q12982 314 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 CAPRIN1Q14444 709 aaKnown RBP11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 SULT1C3Q6IMI6 304 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 UGT2A3Q6UWM9 527 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 OTOP2Q7RTS6 562 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 TMEM25Q86YD3 366 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 AQP12AQ8IXF9 295 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 DCBLD1Q8N8Z6 715 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 FNDC5Q8NAU1 212 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 GOLM1Q8NBJ4 401 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 PHC3Q8NDX5 983 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 OR2T34Q8NGX1 318 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 OR2T3Q8NH03 318 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 UBTD2Q8WUN7 234 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 SLC45A3Q96JT2 553 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 ZNF641Q96N77 438 aaPredicted RBP11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 EFHD1Q9BUP0 239 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 C11orf49Q9H6J7 331 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 IPPKQ9H8X2 491 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 ARMC1Q9NVT9 282 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 TSR3Q9UJK0 312 aaKnown RBP11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 LEF1Q9UJU2 399 aaPredicted RBP11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 CCL26Q9Y258 94 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 IRAK3Q9Y616 596 aa11.24□□□□□ -0.61
SLC28A1-204ENST00000538177 DYTNA2CJ06 578 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 TXNDC9O14530 226 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 CBSLP0DN79 551 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 ATP6V1B2P21281 511 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 IL12AP29459 219 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 CBSP35520 551 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 HSPA7P48741 367 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 CCNHP51946 323 aaPredicted RBP11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 CHN2P52757 468 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 NFYCQ13952 458 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 PHKG1Q16816 387 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 TTLL9Q3SXZ7 439 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 CARD16Q5EG05 197 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 LRRC66Q68CR7 880 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 IL27RAQ6UWB1 636 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 RNF165Q6ZSG1 346 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 MILR1Q7Z6M3 343 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 PROKR1Q8TCW9 393 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 LRTOMTQ8WZ04 291 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 TMEM125Q96AQ2 219 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 VPS33AQ96AX1 596 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 RHBDF1Q96CC6 855 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 ASIC4Q96FT7 647 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 PAWRQ96IZ0 340 aaKnown RBP11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 C1orf50Q9BV19 199 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 CD244Q9BZW8 370 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 TRIM15Q9C019 465 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 HCFC1R1Q9NWW0 138 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 KCTD5Q9NXV2 234 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 SLC25A13Q9UJS0 675 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 IGLV3-16A0A075B6K0 115 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 A0A1W2PQ67 120 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 GRXCR2A6NFK2 248 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 CCDC154A6NI56 674 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 LSM1O15116 133 aaKnown RBP11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 MOSPD3O75425 235 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 NPPAP01160 153 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 MSH3P20585 1137 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 LHCGRP22888 699 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 DDX6P26196 483 aaKnown RBP eCLIP11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 GRIA3P42263 894 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 CLCN2P51788 898 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 YBX1P67809 324 aaKnown RBP11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 PAGE3Q5JUK9 113 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms