RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 B3GALT4O96024 378 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 C8AP07357 584 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 CHRM1P11229 460 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 BPIP17213 487 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 NTHL1P78549 312 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 PRKCQQ04759 706 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 LAPTM5Q13571 262 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 SF1Q15637 639 aaKnown RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 TYSND1Q2T9J0 566 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 LRRC66Q68CR7 880 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 UGT2A3Q6UWM9 527 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 GCNT7Q6ZNI0 430 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 RBM23Q86U06 439 aaKnown RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 PHACTR4Q8IZ21 702 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 ADCY4Q8NFM4 1077 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 GPR150Q8NGU9 434 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 SLCO4A1Q96BD0 722 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 FAM126AQ9BYI3 521 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 LINC00597Q9H2U6 94 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 CWH43Q9H720 699 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 PHF24Q9UPV7 400 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 LOC730098B7Z3J9 87 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 PGLSO95336 258 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 IGSF6O95976 241 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 ESR1P03372 595 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 CCL5P13501 91 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 FASP25445 335 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 IL12AP29459 219 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 SERPINA4P29622 427 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 RECQLP46063 649 aaPredicted RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 IST1P53990 364 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 CASP9P55211 416 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 OR4D2P58180 307 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 MYBPC1Q00872 1141 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 SMARCB1Q12824 385 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 ABRQ12979 859 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 SELPLGQ14242 412 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 FAM174BQ3ZCQ3 159 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TTC33Q6PID6 262 aaPredicted RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 DDX53Q86TM3 631 aaKnown RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TMEM25Q86YD3 366 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TMEM102Q8N9M5 508 aaPredicted RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 CHST14Q8NCH0 376 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 CATSPER1Q8NEC5 780 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 RHEBL1Q8TAI7 183 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TMIGD2Q96BF3 282 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TCEAL4Q96EI5 215 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 FBXL20Q96IG2 436 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TCF12Q99081 682 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TTLL2Q9BWV7 592 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 ATP13A3Q9H7F0 1226 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 SUCOQ9UBS9 1254 aaKnown RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 ZNF490Q9ULM2 529 aaPredicted RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 OAS3Q9Y6K5 1087 aaKnown RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 DOCK4Q8N1I0 1966 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 A0A1B0GVG6 124 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 PRSS51A0A1B0GVH4 220 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TGM5O43548 720 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TSPAN12O95859 305 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 F11P03951 625 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 HALP42357 657 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 INHBCP55103 352 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 ACVR1Q04771 509 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 PRKG2Q13237 762 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 NFATC2Q13469 925 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 SLC14A2Q15849 920 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 GTDC1Q4AE62 458 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 HMBOX1Q6NT76 420 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 ANGPTL8Q6UXH0 198 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 ZSWIM9Q86XI8 627 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 CLEC4FQ8N1N0 589 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 GPR26Q8NDV2 337 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 OR10A6Q8NH74 314 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 PNPT1Q8TCS8 783 aaKnown RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 MED8Q96G25 268 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 ZBTB18Q99592 522 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TMEM175Q9BSA9 504 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 EBPLQ9BY08 206 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TMEM181Q9P2C4 612 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 LIMD1Q9UGP4 676 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 VPS4AQ9UN37 437 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 TBC1D30Q9Y2I9 924 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 HEMK1Q9Y5R4 338 aaPredicted RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 SCN5AQ14524 2016 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 SDK1Q7Z5N4 2213 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 H3BSA7 217 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 EI24O14681 340 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 SLC22A2O15244 555 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 ULK1O75385 1050 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 HSPA1AP0DMV8 641 aaKnown RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 HSPA1BP0DMV9 641 aaKnown RBP8.57□□□□□ -1.04
UBE3B-208ENST00000538070 COL6A1P12109 1028 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 DNAJB1P25685 340 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 ATP13A5Q4VNC0 1218 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 NANOGP8Q6NSW7 305 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 BLOC1S3Q6QNY0 202 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 CYP20A1Q6UW02 462 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 SERPINA13PQ6UXR4 307 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 DPY19L3Q6ZPD9 716 aa8.57□□□□□ -1.04
UBE3B-208ENST00000538070 Q6ZSR9 355 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms