RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ARHGAP22Q7Z5H3 698 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 CLEC14AQ86T13 490 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 LINC00523Q86TU6 105 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 PIM3Q86V86 326 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 CFAP206Q8IYR0 622 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 FBXO39Q8N4B4 442 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 BMPERQ8N8U9 685 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 DNAAF3Q8N9W5 541 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 OR4D9Q8NGE8 314 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 OR2L2Q8NH16 312 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 WDR36Q8NI36 951 aaKnown RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 LKAAEAR1Q8TD35 194 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 MAIP1Q8WWC4 291 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 RSC1A1Q92681 617 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 CCDC74BQ96LY2 380 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 FCRL3Q96P31 734 aaPredicted RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 SLC38A3Q99624 504 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 COPS8Q99627 209 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 WWP1Q9H0M0 922 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 OR52A5Q9H2C5 316 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 UCK1Q9HA47 277 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 EPB41L5Q9HCM4 733 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 OCIAD1Q9NX40 245 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 SYBUQ9NX95 663 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 KCNK4Q9NYG8 393 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 CRLS1Q9UJA2 301 aa8.23□□□□□ -1.09
SPARC-208ENST00000538026 CFAP20Q9Y6A4 193 aaKnown RBP8.23□□□□□ -1.09
SPARC-208ENST00000538026 HELZ2Q9BYK8 2649 aaKnown RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 FER1L5A0AVI2 2057 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 LILRA5A6NI73 299 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 OR5K4A6NMS3 321 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 PDZK1P1A8MUH7 402 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 BHMG1C9JSJ3 638 aaPredicted RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 PGRMC1O00264 195 aaKnown RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 CES2O00748 559 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 NRDCO43847 1150 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 KIF1CO43896 1103 aaKnown RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 KIF5CO60282 957 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 KCNJ13O60928 360 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 PHF2O75151 1096 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 KRT14P02533 472 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 POLBP06746 335 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 F7P08709 466 aaPredicted RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 TPBGLP0DKB5 382 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 ITGALP20701 1170 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 IDSP22304 550 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 AKT1P31749 480 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 MAGEA3P43357 314 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 LEPRP48357 1165 aaKnown RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 ARCN1P48444 511 aaKnown RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 ERVPABLB-1P60509 514 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 GPLD1P80108 840 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 TLE3Q04726 772 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 CACNG1Q06432 222 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 GPS1Q13098 491 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 GSE1Q14687 1217 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 TGIF1Q15583 401 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 CLPPQ16740 277 aaPredicted RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 SKIDA1Q1XH10 827 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 COL28A1Q2UY09 1125 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 PHF19Q5T6S3 580 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 FOXR1Q6PIV2 292 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 CCDC137Q6PK04 289 aaKnown RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 WDR74Q6RFH5 385 aaPredicted RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 PPP1R21Q6ZMI0 780 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 SLC9B2Q86UD5 537 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 SPACA3Q8IXA5 215 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 NAT8LQ8N9F0 302 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 NCSTNQ92542 709 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 ULK4Q96C45 1275 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 MFSD3Q96ES6 412 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 NAF1Q96HR8 494 aaKnown RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 SGSM3Q96HU1 749 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 ZNF578Q96N58 590 aaPredicted RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 TMEM74Q96NL1 305 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 DCBLD2Q96PD2 775 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 KIFC1Q9BW19 673 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 SPRY4Q9C004 299 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 DDX47Q9H0S4 455 aaKnown RBP8.22□□□□□ -1.09
SPARC-208ENST00000538026 PLAC1Q9HBJ0 212 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 KCND1Q9NSA2 647 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 HOMER3Q9NSC5 361 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 FOXJ2Q9P0K8 574 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 FAM8A1Q9UBU6 413 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 LOXL2Q9Y4K0 774 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.22□□□□□ -1.09
SPARC-208ENST00000538026 PCM1Q15154 2024 aa8.22□□□□□ -1.09
SPARC-208ENST00000538026 CCDC88CQ9P219 2028 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 C17orf113A0A1B0GUU1 675 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 HEATR9A2RTY3 570 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 IQCF5A8MTL0 148 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 A8MU76 341 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 GOLGA8KD6RF30 607 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 E7EVH7 732 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 GOLGA8TH3BQL2 631 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 PRAMEF10O60809 474 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 VIPP01282 170 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 C9P02748 559 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 ITGA2BP08514 1039 aa8.21□□□□□ -1.1
SPARC-208ENST00000538026 MTHFD1P11586 935 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms