RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 NOBOXO60393 691 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 BRINP1O60477 761 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 CST8O60676 142 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 TCEA3O75764 348 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 ZRANB2O95218 330 aaKnown RBP eCLIP6.98□□□□□ -1.29
YBX3-206ENST00000536823 IPO7O95373 1038 aaKnown RBP6.98□□□□□ -1.29
YBX3-206ENST00000536823 CLDN7O95471 211 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 PYGLP06737 847 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 PECAM1P16284 738 aaPredicted RBP6.98□□□□□ -1.29
YBX3-206ENST00000536823 PTPN3P26045 913 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 GPR1P46091 355 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 ILF3Q12906 894 aaKnown RBP eCLIP6.98□□□□□ -1.29
YBX3-206ENST00000536823 PPP2R5EQ16537 467 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 FBXW10Q5XX13 1052 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 KAZNQ674X7 775 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 RAD9BQ6WBX8 426 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 RBM44Q6ZP01 1051 aaKnown RBP6.98□□□□□ -1.29
YBX3-206ENST00000536823 BBS12Q6ZW61 710 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 NLRC3Q7RTR2 1065 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 TAF8Q7Z7C8 310 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 DAAM2Q86T65 1068 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 NT5DC3Q86UY8 548 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 GPR156Q8NFN8 814 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 OR6C4Q8NGE1 309 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 EXD1Q8NHP7 514 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 KIAA1524Q8TCG1 905 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 TFB1MQ8WVM0 346 aaKnown RBP6.98□□□□□ -1.29
YBX3-206ENST00000536823 KRT35Q92764 455 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 SCAMP4Q969E2 229 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 GRAMD1AQ96CP6 724 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 AP2M1Q96CW1 435 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 AGAP3Q96P47 875 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 QKIQ96PU8 341 aaKnown RBP eCLIP6.98□□□□□ -1.29
YBX3-206ENST00000536823 TRIB3Q96RU7 358 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 CCDC3Q9BQI4 270 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 MLPHQ9BV36 600 aaPredicted RBP6.98□□□□□ -1.29
YBX3-206ENST00000536823 ADGRE3Q9BY15 652 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 SUDS3Q9H7L9 328 aaPredicted RBP6.98□□□□□ -1.29
YBX3-206ENST00000536823 GLOD4Q9HC38 313 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 TRNAU1APQ9NX07 287 aaKnown RBP6.98□□□□□ -1.29
YBX3-206ENST00000536823 GULP1Q9UBP9 304 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 CD84Q9UIB8 345 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 MOSPD1Q9UJG1 213 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 SUFUQ9UMX1 484 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 SLC17A4Q9Y2C5 497 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 REXO2Q9Y3B8 237 aaKnown RBP6.98□□□□□ -1.29
YBX3-206ENST00000536823 EPN1Q9Y6I3 576 aaPredicted RBP6.98□□□□□ -1.29
YBX3-206ENST00000536823 CAPN6Q9Y6Q1 641 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 ATMQ13315 3056 aa6.98□□□□□ -1.29
YBX3-206ENST00000536823 SCN8AQ9UQD0 1980 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 CFAP46Q8IYW2 2715 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 A0A087WV48 116 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 RGSL1A5PLK6 1076 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 HACD1B0YJ81 288 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 ANKRD66B4E2M5 251 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 D6RAR5 112 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 SMAD7O15105 426 aaKnown RBP6.97□□□□□ -1.29
YBX3-206ENST00000536823 PJA2O43164 708 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 TLX3O43711 291 aaPredicted RBP6.97□□□□□ -1.29
YBX3-206ENST00000536823 NDST3O95803 873 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 FUCA1P04066 466 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 TRHRP34981 398 aaPredicted RBP6.97□□□□□ -1.29
YBX3-206ENST00000536823 CTNNA1P35221 906 aaKnown RBP6.97□□□□□ -1.29
YBX3-206ENST00000536823 PTPN7P35236 360 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 CCNFP41002 786 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 GNPDA1P46926 289 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 SPINT3P49223 89 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 VAV2P52735 878 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 PDX1P52945 283 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 DCDC1P59894 354 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 GABREP78334 506 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 CDK18Q07002 472 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 ADCY2Q08462 1091 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 WASHC5Q12768 1159 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 SPIDRQ14159 915 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 GALNT3Q14435 633 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 HLTFQ14527 1009 aaKnown RBP eCLIP6.97□□□□□ -1.29
YBX3-206ENST00000536823 LLGL1Q15334 1064 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 NKG7Q16617 165 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 ISXQ2M1V0 245 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 TBC1D25Q3MII6 688 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 C14orf28Q4W4Y0 310 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 TEX44Q53QW1 395 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 FAM182AQ5T1J6 154 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 CERCAMQ5T4B2 595 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 HENMT1Q5T8I9 393 aaKnown RBP6.97□□□□□ -1.29
YBX3-206ENST00000536823 DOK6Q6PKX4 331 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 B4GALNT4Q76KP1 1039 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 TRIM74Q86UV6 250 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 NRROSQ86YC3 692 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 TMEM139Q8IV31 216 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 CCDC50Q8IVM0 306 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 RCOR2Q8IZ40 523 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 LRRC57Q8N9N7 239 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 ACRBPQ8NEB7 543 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 FAM46DQ8NEK8 389 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 SPATA22Q8NHS9 363 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 CCL4L1Q8NHW4 92 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 CCHCR1Q8TD31 782 aa6.97□□□□□ -1.29
YBX3-206ENST00000536823 P3H4Q92791 437 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms