RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 STN1Q9H668 368 aaKnown RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 SLC40A1Q9NP59 571 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 CHRAC1Q9NRG0 131 aa12.9□□□□□ -0.34
PRKDC-206ENST00000536429 ZNF106Q9H2Y7 1883 aaKnown RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 ZFC3H1O60293 1989 aaKnown RBP12.9□□□□□ -0.34
PRKDC-206ENST00000536429 AHCTF1Q8WYP5 2266 aa12.9□□□□□ -0.35
PRKDC-206ENST00000536429 A8MU76 341 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 ZW10O43264 779 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 DUX1O43812 170 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 OR1I1O60431 355 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 KCNJ13O60928 360 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 AVILO75366 819 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 TMEM63AO94886 807 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 GAS8O95995 478 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 POLBP06746 335 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 ITGA2BP08514 1039 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 TPSB2P20231 275 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 MGAT1P26572 445 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 EPHA4P54764 986 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 GFERP55789 205 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 GNG11P61952 73 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 ACVR1Q04771 509 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 EIF3IQ13347 325 aaKnown RBP12.89□□□□□ -0.35
PRKDC-206ENST00000536429 GPR18Q14330 331 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 TPSAB1Q15661 275 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 CLPPQ16740 277 aaPredicted RBP12.89□□□□□ -0.35
PRKDC-206ENST00000536429 TMEM71Q6P5X7 295 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 CCDC137Q6PK04 289 aaKnown RBP12.89□□□□□ -0.35
PRKDC-206ENST00000536429 CES3Q6UWW8 571 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 C4orf22Q6V702 233 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 CLEC14AQ86T13 490 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 LDB1Q86U70 411 aaPredicted RBP12.89□□□□□ -0.35
PRKDC-206ENST00000536429 CFAP206Q8IYR0 622 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 C17orf53Q8N3J3 647 aaPredicted RBP12.89□□□□□ -0.35
PRKDC-206ENST00000536429 RSC1A1Q92681 617 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 SH3KBP1Q96B97 665 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 CXorf40BQ96DE9 158 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 INSM2Q96T92 566 aaPredicted RBP12.89□□□□□ -0.35
PRKDC-206ENST00000536429 UCK1Q9HA47 277 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 THSD1Q9NS62 852 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 POT1Q9NUX5 634 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 IMP3Q9NV31 184 aaKnown RBP12.89□□□□□ -0.35
PRKDC-206ENST00000536429 SYBUQ9NX95 663 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 FOXJ2Q9P0K8 574 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 MARCH4Q9P2E8 410 aaPredicted RBP12.89□□□□□ -0.35
PRKDC-206ENST00000536429 KLHL3Q9UH77 587 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 RIMKLBQ9ULI2 386 aa12.89□□□□□ -0.35
PRKDC-206ENST00000536429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.88□□□□□ -0.35
PRKDC-206ENST00000536429 CFAP99D6REC4 459 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 PHF2O75151 1096 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 UBXN7O94888 489 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 JMJD7P0C870 316 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 RALBP11234 206 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 FGF3P11487 239 aaPredicted RBP12.88□□□□□ -0.35
PRKDC-206ENST00000536429 MTHFD1P11586 935 aaKnown RBP12.88□□□□□ -0.35
PRKDC-206ENST00000536429 NMBRP28336 390 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 SLC5A2P31639 672 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 HALP42357 657 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 MAGEA6P43360 314 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 MAPK10P53779 464 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 PCBP4P57723 403 aaKnown RBP12.88□□□□□ -0.35
PRKDC-206ENST00000536429 PPP1CAP62136 330 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 GSE1Q14687 1217 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 PCID2Q5JVF3 399 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 LRRC8BQ6P9F7 803 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 WDR74Q6RFH5 385 aaPredicted RBP12.88□□□□□ -0.35
PRKDC-206ENST00000536429 AFTPHQ6ULP2 937 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 NAPRTQ6XQN6 538 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 JAMLQ86YT9 394 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 SPACA3Q8IXA5 215 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 MPP5Q8N3R9 675 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 PPHLN1Q8NEY8 458 aaKnown RBP12.88□□□□□ -0.35
PRKDC-206ENST00000536429 OR6P1Q8NGX9 317 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 HM13Q8TCT9 377 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 HEXDCQ8WVB3 486 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 CPT1BQ92523 772 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 USP7Q93009 1102 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 NRTNQ99748 197 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 CMKLR1Q99788 373 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 TRIM56Q9BRZ2 755 aaKnown RBP12.88□□□□□ -0.35
PRKDC-206ENST00000536429 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.88□□□□□ -0.35
PRKDC-206ENST00000536429 COG4Q9H9E3 785 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 TREX1Q9NSU2 369 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 OCIAD1Q9NX40 245 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 PDP2Q9P2J9 529 aa12.88□□□□□ -0.35
PRKDC-206ENST00000536429 PTPRQQ9UMZ3 2332 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 C9orf172C9J069 976 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 CES2O00748 559 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 HGSO14964 777 aaPredicted RBP12.87□□□□□ -0.35
PRKDC-206ENST00000536429 PRAMEF10O60809 474 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 ARNTP27540 789 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 PDHA2P29803 388 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 PREPP48147 710 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 LEPRP48357 1165 aaKnown RBP12.87□□□□□ -0.35
PRKDC-206ENST00000536429 ARHGAP22Q7Z5H3 698 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 CAND1Q86VP6 1230 aaKnown RBP12.87□□□□□ -0.35
PRKDC-206ENST00000536429 AVL9Q8NBF6 648 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 ZNF248Q8NDW4 579 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 OR4L1Q8NH43 312 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 CAPZA3Q96KX2 299 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms