RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CANT1Q8WVQ1 401 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 AKIP1Q9NQ31 210 aa17.72■□□□□ 0.43
RAB40C-203ENST00000535977 INSIG1O15503 277 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 NDUFS3O75489 264 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 SOAT2O75908 522 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 MATN4O95460 622 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 GRIK2Q13002 908 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 PFKFB4Q16877 469 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 TXNDC11Q6PKC3 985 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 PLEKHG7Q6ZR37 379 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 PACRGLQ8N7B6 248 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 TMEM175Q9BSA9 504 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 WDR12Q9GZL7 423 aaKnown RBP17.71■□□□□ 0.43
RAB40C-203ENST00000535977 ATP13A3Q9H7F0 1226 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 MARCH7Q9H992 704 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 CREBZFQ9NS37 354 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 PCDHGA11Q9Y5H2 935 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 GREB1Q4ZG55 1949 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 ILVBLA1L0T0 632 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 HOXA2O43364 376 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 LBPP18428 481 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 MRPL19P49406 292 aaKnown RBP17.71■□□□□ 0.43
RAB40C-203ENST00000535977 LCP2Q13094 533 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 SEMA3AQ14563 771 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 OR4D1Q15615 310 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 GEN1Q17RS7 908 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 KIF19Q2TAC6 998 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 TTC23LQ6PF05 361 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 RFPL4BQ6ZWI9 263 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 BPHLQ86WA6 291 aaPredicted RBP17.71■□□□□ 0.43
RAB40C-203ENST00000535977 GALNT13Q8IUC8 556 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 GOLM1Q8NBJ4 401 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 TWIST2Q8WVJ9 160 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.71■□□□□ 0.432e-6■■■■■ 54.9
RAB40C-203ENST00000535977 ZUFSPQ96AP4 578 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 CASD1Q96PB1 797 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 TRIM15Q9C019 465 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 TBC1D14Q9P2M4 693 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 RNF112Q9ULX5 631 aa17.71■□□□□ 0.43
RAB40C-203ENST00000535977 UBXN8O00124 270 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 STX16O14662 325 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 KMOO15229 486 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 CXCR2P25025 360 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 HLCSP50747 726 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 CLCQ05315 142 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 DUSP4Q13115 394 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 AQP6Q13520 282 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 C6orf10Q5SRN2 563 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 INTS11Q5TA45 600 aaKnown RBP17.71■□□□□ 0.42
RAB40C-203ENST00000535977 ANKS6Q68DC2 871 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 TAS2R42Q7RTR8 314 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 SPATA19Q7Z5L4 167 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 AKAP14Q86UN6 197 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 FBXO39Q8N4B4 442 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 C1QTNF3Q9BXJ4 246 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 NUSAP1Q9BXS6 441 aaKnown RBP17.71■□□□□ 0.42
RAB40C-203ENST00000535977 IFT80Q9P2H3 777 aaPredicted RBP17.71■□□□□ 0.42
RAB40C-203ENST00000535977 ITM2BQ9Y287 266 aa17.71■□□□□ 0.42
RAB40C-203ENST00000535977 CHD5Q8TDI0 1954 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 RNF103-CHMP3A0A140T963 221 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 ENPP3O14638 875 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 NUAK1O60285 661 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 ELNP15502 786 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 KCNQ1P51787 676 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 CDH13P55290 713 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 CHST9Q7L1S5 443 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 GLT6D1Q7Z4J2 308 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 DHFR2Q86XF0 187 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 ZFP90Q8TF47 636 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 SEPT8Q92599 483 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 PLD4Q96BZ4 506 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 RMDN1Q96DB5 314 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 MYEOVQ96EZ4 313 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 C3orf30Q96M34 536 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 BEGAINQ9BUH8 593 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 MRPL9Q9BYD2 267 aaKnown RBP17.7■□□□□ 0.42
RAB40C-203ENST00000535977 LHPPQ9H008 270 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 TRIT1Q9H3H1 467 aaKnown RBP17.7■□□□□ 0.42
RAB40C-203ENST00000535977 SOX17Q9H6I2 414 aaPredicted RBP17.7■□□□□ 0.42
RAB40C-203ENST00000535977 MOV10Q9HCE1 1003 aaKnown RBP17.7■□□□□ 0.42
RAB40C-203ENST00000535977 THG1LQ9NWX6 298 aaKnown RBP17.7■□□□□ 0.42
RAB40C-203ENST00000535977 MARCH5Q9NX47 278 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 COMMD10Q9Y6G5 202 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 A0A0D9SEW6 157 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 A0A0J9YYE9 177 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 TOR1BO14657 336 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 B4GAT1O43505 415 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 LPOP22079 712 aaPredicted RBP17.7■□□□□ 0.42
RAB40C-203ENST00000535977 TUFMP49411 452 aaKnown RBP17.7■□□□□ 0.42
RAB40C-203ENST00000535977 FOXM1Q08050 763 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 PLCL1Q15111 1095 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 LRRC8DQ7L1W4 858 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 SLC22A16Q86VW1 577 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 HEATR4Q86WZ0 1026 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 FUNDC1Q8IVP5 155 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 CFAP52Q8N1V2 620 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 PARP8Q8N3A8 854 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 MINDY1Q8N5J2 469 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 EXT2Q93063 718 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 TTPALQ9BTX7 342 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms