RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 RAB43Q86YS6 212 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 D2HGDHQ8N465 521 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 RBMXL3Q8N7X1 1067 aaKnown RBP7.85□□□□□ -1.15
CHFR-211ENST00000535897 TMEM102Q8N9M5 508 aaPredicted RBP7.85□□□□□ -1.15
CHFR-211ENST00000535897 SLC38A9Q8NBW4 561 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 OR8K5Q8NH50 307 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 ZNF501Q96CX3 271 aaPredicted RBP7.85□□□□□ -1.15
CHFR-211ENST00000535897 HDAC11Q96DB2 347 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 SNRNP40Q96DI7 357 aaKnown RBP7.85□□□□□ -1.15
CHFR-211ENST00000535897 AGAP3Q96P47 875 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 VPS35Q96QK1 796 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 ZNF670Q9BS34 389 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 NLNQ9BYT8 704 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 ISCUQ9H1K1 167 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 ACTR5Q9H9F9 607 aaPredicted RBP7.85□□□□□ -1.15
CHFR-211ENST00000535897 CBX8Q9HC52 389 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 MAGEE1Q9HCI5 957 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 ASF1BQ9NVP2 202 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 AIPL1Q9NZN9 384 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 NFKBIL1Q9UBC1 381 aaPredicted RBP7.85□□□□□ -1.15
CHFR-211ENST00000535897 SRPK3Q9UPE1 567 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 HEY1Q9Y5J3 304 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 CFAP20Q9Y6A4 193 aaKnown RBP7.85□□□□□ -1.15
CHFR-211ENST00000535897 OTOGQ6ZRI0 2925 aa7.85□□□□□ -1.15
CHFR-211ENST00000535897 C9J4A7 227 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 KCNJ13O60928 360 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 PMPCBO75439 489 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 LCA5LO95447 670 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 CBX6O95503 412 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 RAB40ALP0C0E4 278 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 SLC35G4P0C7Q5 338 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 HLA-DPA1P20036 260 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 CDH3P22223 829 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 AKT1P31749 480 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 PREPP48147 710 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 IFI35P80217 286 aaPredicted RBP7.84□□□□□ -1.15
CHFR-211ENST00000535897 ABRQ12979 859 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 NFE2L1Q14494 772 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 GSE1Q14687 1217 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 PTCHD3Q3KNS1 767 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 PLEKHN1Q494U1 663 aaPredicted RBP7.84□□□□□ -1.15
CHFR-211ENST00000535897 PLEKHS1Q5SXH7 462 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 FNBP1LQ5T0N5 605 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 VWA5B1Q5TIE3 1220 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 PRAMEF17Q5VTA0 474 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 LCN10Q6JVE6 187 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 DUS1LQ6P1R4 473 aaKnown RBP7.84□□□□□ -1.15
CHFR-211ENST00000535897 FAM151BQ6UXP7 276 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 FAM83HQ6ZRV2 1179 aaPredicted RBP7.84□□□□□ -1.15
CHFR-211ENST00000535897 NT5DC3Q86UY8 548 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 SYTL1Q8IYJ3 562 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 DSELQ8IZU8 1212 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 CNTD1Q8N815 330 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 RASGEF1AQ8N9B8 481 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 TTC13Q8NBP0 860 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 CLEC1AQ8NC01 280 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 FAM71BQ8TC56 605 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 BRSK1Q8TDC3 778 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.84□□□□□ -1.15
CHFR-211ENST00000535897 ADAMTS17Q8TE56 1095 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 MOCOSQ96EN8 888 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 IMP4Q96G21 291 aaKnown RBP7.84□□□□□ -1.15
CHFR-211ENST00000535897 C12orf66Q96MD2 445 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 TRIB3Q96RU7 358 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 SRPK1Q96SB4 655 aaKnown RBP7.84□□□□□ -1.15
CHFR-211ENST00000535897 WWP1Q9H0M0 922 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 RTN4Q9NQC3 1192 aaKnown RBP7.84□□□□□ -1.15
CHFR-211ENST00000535897 SEMA5BQ9P283 1151 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 B3GNT3Q9Y2A9 372 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 PADI2Q9Y2J8 665 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 SPO11Q9Y5K1 396 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 APCP25054 2843 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 POLQO75417 2590 aa7.84□□□□□ -1.15
CHFR-211ENST00000535897 FBN2P35556 2912 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 GLYATL1P3A0A0U1RQE8 302 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 ARHGAP10A1A4S6 786 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 GSAPA4D1B5 854 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 WIPF3A6NGB9 483 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 SLC9B1P1A6NJY1 282 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 TMEM150CB9EJG8 249 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 PEX12O00623 359 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 AURKAO14965 403 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 LDB2O43679 373 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 UGT1A9O60656 530 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 NDST3O95803 873 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 MT-CYBP00156 380 aaPredicted RBP7.83□□□□□ -1.16
CHFR-211ENST00000535897 UGT1A6P19224 532 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 POLR2CP19387 275 aaPredicted RBP7.83□□□□□ -1.16
CHFR-211ENST00000535897 AGXTP21549 392 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 UGT1A1P22309 533 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 UGT1A4P22310 534 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 ELAVL4P26378 380 aaKnown RBP7.83□□□□□ -1.16
CHFR-211ENST00000535897 GLRBP48167 497 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 ARSEP51690 589 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 KPNA2P52292 529 aaKnown RBP7.83□□□□□ -1.16
CHFR-211ENST00000535897 CTSCP53634 463 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 ADCY2Q08462 1091 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 PPIDQ08752 370 aaKnown RBP7.83□□□□□ -1.16
CHFR-211ENST00000535897 DMPKQ09013 629 aa7.83□□□□□ -1.16
CHFR-211ENST00000535897 SLC10A2Q12908 348 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms