RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SGSM3Q96HU1 749 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 LINC00615Q96LM1 132 aaPredicted RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 EBNA1BP2Q99848 306 aaKnown RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 SCNM1Q9BWG6 230 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 FBXO6Q9NRD1 293 aaPredicted RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 C20orf96Q9NUD7 363 aaPredicted RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 WHRNQ9P202 907 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 UTP11Q9Y3A2 253 aaKnown RBP13.75□□□□□ -0.21
VPS11-205ENST00000534551 TEX264Q9Y6I9 313 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 ASPMQ8IZT6 3477 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 FREM2Q5SZK8 3169 aa13.75□□□□□ -0.21
VPS11-205ENST00000534551 RHPN2P1A8MT19 583 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 TUBB4AP04350 444 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 VCLP18206 1134 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 PAMP19021 973 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 PDHA2P29803 388 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 SLC19A1P41440 591 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 PLTPP55058 493 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 CALCOCO2Q13137 446 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 CTBP1Q13363 440 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 ILKQ13418 452 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 BIRC2Q13490 618 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 LONRF1Q17RB8 773 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 AMZ1Q400G9 498 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 HSP90AA5PQ58FG0 334 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 AARS2Q5JTZ9 985 aaKnown RBP13.74□□□□□ -0.21
VPS11-205ENST00000534551 NEPROQ6NW34 567 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 B3GNT8Q7Z7M8 397 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 KCNMB4Q86W47 210 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 CILP2Q8IUL8 1156 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 CFAP206Q8IYR0 622 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 PDIK1LQ8N165 341 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 MMGT1Q8N4V1 131 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 FBXO36Q8NEA4 188 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 FBXO25Q8TCJ0 367 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 LPGAT1Q92604 370 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 ZNF514Q96K75 400 aaPredicted RBP13.74□□□□□ -0.21
VPS11-205ENST00000534551 NRTNQ99748 197 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 CCM2Q9BSQ5 444 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 TBC1D10AQ9BXI6 508 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 RAB17Q9H0T7 212 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 P2RY12Q9H244 342 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 IARS2Q9NSE4 1012 aaKnown RBP13.74□□□□□ -0.21
VPS11-205ENST00000534551 IMP3Q9NV31 184 aaKnown RBP13.74□□□□□ -0.21
VPS11-205ENST00000534551 EVA1BQ9NVM1 165 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 NCKIPSDQ9NZQ3 722 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 CPNE7Q9UBL6 633 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 DMGDHQ9UI17 866 aaKnown RBP13.74□□□□□ -0.21
VPS11-205ENST00000534551 TSR3Q9UJK0 312 aaKnown RBP13.74□□□□□ -0.21
VPS11-205ENST00000534551 CRYL1Q9Y2S2 319 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 PCDHB1Q9Y5F3 818 aa13.74□□□□□ -0.21
VPS11-205ENST00000534551 PMS2P1A4D2B8 440 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 E7ESA3 106 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 B4GAT1O43505 415 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 NUDT21O43809 227 aaKnown RBP13.73□□□□□ -0.21
VPS11-205ENST00000534551 NIPSNAP2O75323 286 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 NDUFS3O75489 264 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 PIAS1O75925 651 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 AP2A2O94973 939 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 GP1BAP07359 652 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 OGNP20774 298 aaKnown RBP13.73□□□□□ -0.21
VPS11-205ENST00000534551 IDSP22304 550 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 ALDH4A1P30038 563 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 MAPK9P45984 424 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 FASLGP48023 281 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 TTPAP49638 278 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 GUCY2DQ02846 1103 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 RPE65Q16518 533 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.73□□□□□ -0.21
VPS11-205ENST00000534551 UBAP2Q5T6F2 1119 aaKnown RBP13.73□□□□□ -0.21
VPS11-205ENST00000534551 LYPLAL1Q5VWZ2 237 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 METRNLQ641Q3 311 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 MRNIPQ6NTE8 343 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 ABRAXAS1Q6UWZ7 409 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 CERS6Q6ZMG9 384 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 VRK3Q8IV63 474 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 ZBED8Q8IZ13 594 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 HEXDCQ8WVB3 486 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 ELMO1Q92556 727 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 C12orf66Q96MD2 445 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 INSM2Q96T92 566 aaPredicted RBP13.73□□□□□ -0.21
VPS11-205ENST00000534551 FOXP3Q9BZS1 431 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 RDH14Q9HBH5 336 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 SAYSD1Q9NPB0 183 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 TMEM9Q9P0T7 183 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 ZC3H7BQ9UGR2 993 aaKnown RBP13.73□□□□□ -0.21
VPS11-205ENST00000534551 FAM169AQ9Y6X4 670 aa13.73□□□□□ -0.21
VPS11-205ENST00000534551 ANKRD12Q6UB98 2062 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 BHMG1C9JSJ3 638 aaPredicted RBP13.72□□□□□ -0.21
VPS11-205ENST00000534551 D6RAR5 112 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 PRMT5O14744 637 aaPredicted RBP13.72□□□□□ -0.21
VPS11-205ENST00000534551 TRIM16O95361 564 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 SLC35G4P0C7Q5 338 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 MTHFD1P11586 935 aaKnown RBP13.72□□□□□ -0.21
VPS11-205ENST00000534551 FMO4P31512 558 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 CCR7P32248 378 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 CFHR1Q03591 330 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 THOC5Q13769 683 aaKnown RBP13.72□□□□□ -0.21
VPS11-205ENST00000534551 NR1D2Q14995 579 aa13.72□□□□□ -0.21
VPS11-205ENST00000534551 MAP9Q49MG5 647 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms