RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 BMPERQ8N8U9 685 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 LSM14AQ8ND56 463 aaKnown RBP10.23□□□□□ -0.77
CAPN1-225ENST00000533704 SLC35B2Q8TB61 432 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 SNRNP27Q8WVK2 155 aaKnown RBP10.23□□□□□ -0.77
CAPN1-225ENST00000533704 C1orf54Q8WWF1 131 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 TTC9Q92623 222 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 NKD1Q969G9 470 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 ULK4Q96C45 1275 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 RTP4Q96DX8 246 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 ELMO2Q96JJ3 720 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 ZNF514Q96K75 400 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-225ENST00000533704 DNAJC1Q96KC8 554 aaKnown RBP10.23□□□□□ -0.77
CAPN1-225ENST00000533704 C9orf72Q96LT7 481 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 C12orf66Q96MD2 445 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 ALS2CR12Q96Q35 445 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 ARHGAP9Q9BRR9 750 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 TSGA10Q9BZW7 698 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 B3GNT4Q9C0J1 378 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 SLC40A1Q9NP59 571 aa10.23□□□□□ -0.77
CAPN1-225ENST00000533704 FEZ2Q9UHY8 353 aaPredicted RBP10.23□□□□□ -0.77
CAPN1-225ENST00000533704 GCN1Q92616 2671 aaKnown RBP10.22□□□□□ -0.77
CAPN1-225ENST00000533704 ZNF462Q96JM2 2506 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 MGAT4DA6NG13 374 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-225ENST00000533704 CFAP99D6REC4 459 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 PSMD3O43242 534 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 LDB2O43679 373 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 KIF1CO43896 1103 aaKnown RBP10.22□□□□□ -0.77
CAPN1-225ENST00000533704 IFNB1P01574 187 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 SLC35G4P0C7Q5 338 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 PRSS56P0CW18 603 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 MTHFD1P11586 935 aaKnown RBP10.22□□□□□ -0.77
CAPN1-225ENST00000533704 LIFP15018 202 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 CAPZBP47756 277 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 CDKN1CP49918 316 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-225ENST00000533704 PPP1CAP62136 330 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 KRT33BQ14525 404 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 GSE1Q14687 1217 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 SNX20Q7Z614 316 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 RBM12BQ8IXT5 1001 aaKnown RBP10.22□□□□□ -0.77
CAPN1-225ENST00000533704 CFAP206Q8IYR0 622 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 NXPE1Q8N323 547 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 ZNF843Q8N446 348 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 SPDYE1Q8NFV5 336 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-225ENST00000533704 EXTL1Q92935 676 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 ZDHHC12Q96GR4 267 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 TEFMQ96QE5 360 aaKnown RBP10.22□□□□□ -0.77
CAPN1-225ENST00000533704 INSM2Q96T92 566 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-225ENST00000533704 COPS8Q99627 209 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 SEMA4CQ9C0C4 833 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 LZTFL1Q9NQ48 299 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 ZNF148Q9UQR1 794 aa10.22□□□□□ -0.77
CAPN1-225ENST00000533704 DNMT3AQ9Y6K1 912 aaPredicted RBP10.22□□□□□ -0.77
CAPN1-225ENST00000533704 SPTA1P02549 2419 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 E7EVH7 732 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 STK17BO94768 372 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 AP2A1O95782 977 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 C9P02748 559 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 ANKRD34CP0C6C1 535 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 ETS1P14921 441 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 ARCN1P48444 511 aaKnown RBP10.21□□□□□ -0.77
CAPN1-225ENST00000533704 ARL4DP49703 201 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 SH3BP2P78314 561 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 MSLNQ13421 630 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-225ENST00000533704 RPS6KA1Q15418 735 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 BCL7AQ4VC05 210 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 CCDC38Q502W7 563 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 METRNLQ641Q3 311 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 KCTD11Q693B1 232 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 ARMC6Q6NXE6 501 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 KLHL35Q6PF15 583 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 PPP1R21Q6ZMI0 780 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 PRUNE1Q86TP1 453 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 SERPINA9Q86WD7 417 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 SLC13A5Q86YT5 568 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-225ENST00000533704 RASGRP3Q8IV61 690 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 UNC5BQ8IZJ1 945 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 NLGN4XQ8N0W4 816 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 LILRA3Q8N6C8 439 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-225ENST00000533704 DNAAF3Q8N9W5 541 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 NLGN4YQ8NFZ3 816 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-225ENST00000533704 OR52K1Q8NGK4 314 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 OR2L2Q8NH16 312 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 KIAA1143Q96AT1 154 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-225ENST00000533704 WBP1Q96G27 269 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 RMDN2Q96LZ7 410 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 OR6C1Q96RD1 312 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 GPN2Q9H9Y4 310 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-225ENST00000533704 ARNT2Q9HBZ2 717 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 FBXO8Q9NRD0 319 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 NLE1Q9NVX2 485 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-225ENST00000533704 ZDHHC3Q9NYG2 299 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 ACSL5Q9ULC5 683 aa10.21□□□□□ -0.77
CAPN1-225ENST00000533704 SNRNP200O75643 2136 aaKnown RBP10.21□□□□□ -0.78
CAPN1-225ENST00000533704 CFAP46Q8IYW2 2715 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 ATMQ13315 3056 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 ARHGAP6O43182 974 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 LIASO43766 372 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 GAS8O95995 478 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 ATP1B2P14415 290 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms